Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2801 CTGTTGAAGCTCAAATCACGAAGAGATGTTGTTGATTGGTTGAATTCCGTCATTTCAGACTTCGCATATTCTTGTCTTACACGTTGCTCGGATTTTTTCCCCCGTTTTCAGGACAATCAATTTCGGAAGGTGGACAATTGTAGCAAAGAATTCTCATGGTCAGGGTATCCGTGGACCtgtaggaaaagaagaaagcacTATCAATCATTTAGGTGGAATGGTTTTAAGATATCTGTTCATGACTTTGTACATGTTTTAGCAGAAGAGGACAAGCGTCTAGTTGCCTACTTGGAAGATATGTATGAGGACTCCAGAGGCAACAGGATGGTTATGGTACGCTGGTTTCACAAAATTGACGAGGTTGGTATTGTTTTGCCTCACAGTTTTAGTGACAGAgagattttcttttctctttgtcTTCAAGATCTGAGTATTGAATGCATAGATGGATTGGCTACGGTCCTCAGTCCCCAGCATTACGAAAAGTTTCAGAAGGAAGCAAGACATACTTTGTTGGAACCTTTTGTTTGCGACAATCAAGTTGATAACGATGATATCAAGCACTTCGATATAACTCAAGTTAAGGGTTACTGGAAACAGGAAATACTGAGATACATGTATACCCTTTCTGACTCAAAGTCTAATGGGAGTTCTCAGCAATCTGATGATACCCCAAAACTGGAAGAGGGCTCCAAGTTTACCTCTGGGATTAGACCCAAGAAGAGGCTGCGCTGGTCAAAAGTTGATGGCAGTGAAGGTGCAGCCGTCGAtttggaaaatataaataatagtgGGAATGAAACCAAAAGCAAAAGTGGAAACAGTTCTTTGAATCCGGCTGCCTCCACCACCACCTTTACAGCTGGCAAAGAGACCAAAGAAAACGCGGTTAAGTCCTTAGTTATAGGTTCCCAAGTTGAGGTCCTCTCACAAGATAGTGGTATTAGAGGCTGCTGGTTTATTGCTTCTATCATTAAGAAACACAAGGACAAAGTGAAGGTGCAATATCATGACATTCAGGATGCAGCTGATGAATCTAAGAAACTTGAGgAATGGGTTTTAGCTTCCAGAATTGCAGCACCTGACCACTTGAATCTCCGATTGAATGGAAGGACTAAGATCCGACCAGCGCCTCAGTCCAATCAGTGTAAAGCTTCTGGGCTGGTTAACGTTGGCTGCATTGTTGATGTCTGGTGGAACAATGGATGGTGGGAAGGCATTGTTGTTCAGAAAGATTCTGAAGCCAAGTGTCATGTTTATTTCCCAGGGGAAAAGCTTGTGTCAACATTCGGTCTCAGTGACTTGAGACACTCTCAAGAATGGACAGGAGTTGGGTGGTTGAATGTCAGTGAAAGGCCTGACCTTGTAAGTTCTATATTATCCAGCTTAAAATCTTCACAAGATCCCACTGGCAAATCAGCCATAAGAGTATCTGACGGAGATGATGTCAAACAATCAAAGCAAGGCGATACTAGCTTGAACTCTGAAAGATATCATAAATCAAGAAAGCCCGAGCTTGTTCCAGACCTCTCCAAGGATGATCTGCTTTCTCAGCTTAAGTGGAATACATCAAGGAAGAGGCGACGCAGCAGCAGTAGTGGCGGATCTTGTCGCAACAGCAACAGCAGAAAGTCCCCGAATGCCTCAGACCCTCATGCTGCTGGTGCCGACAACTACATGATATCTGCATCCTTGAAAGTTGTGGATCACGATGACTGCAAATACAGCAGGGGGGATCCAACCATTTTCAGCTCTTCAGTTGTGCCCTCTTTAACTAACCTGGTCATGTGTAGGTGA 1797 0.4235 LLKLKSRRDVVDWLNSVISDFAYSCLTRCSDFFPRFQDNQFRKVDNCSKEFSWSGYPWTCRKRRKHYQSFRWNGFKISVHDFVHVLAEEDKRLVAYLEDMYEDSRGNRMVMVRWFHKIDEVGIVLPHSFSDREIFFSLCLQDLSIECIDGLATVLSPQHYEKFQKEARHTLLEPFVCDNQVDNDDIKHFDITQVKGYWKQEILRYMYTLSDSKSNGSSQQSDDTPKLEEGSKFTSGIRPKKRLRWSKVDGSEGAAVDLENINNSGNETKSKSGNSSLNPAASTTTFTAGKETKENAVKSLVIGSQVEVLSQDSGIRGCWFIASIIKKHKDKVKVQYHDIQDAADESKKLEEWVLASRIAAPDHLNLRLNGRTKIRPAPQSNQCKASGLVNVGCIVDVWWNNGWWEGIVVQKDSEAKCHVYFPGEKLVSTFGLSDLRHSQEWTGVGWLNVSERPDLVSSILSSLKSSQDPTGKSAIRVSDGDDVKQSKQGDTSLNSERYHKSRKPELVPDLSKDDLLSQLKWNTSRKRRRSSSSGGSCRNSNSRKSPNASDPHAAGADNYMISASLKVVDHDDCKYSRGDPTIFSSSVVPSLTNLVMCR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2801 598 SMART agenet_At_2 298 364 IPR014002 -
Sto6g2801 598 SMART agenet_At_2 387 443 IPR014002 -
Sto6g2801 598 MobiDBLite consensus disorder prediction 257 288 - -
Sto6g2801 598 MobiDBLite consensus disorder prediction 211 233 - -
Sto6g2801 598 ProSiteProfiles BAH domain profile. 75 192 IPR001025 GO:0003682
Sto6g2801 598 MobiDBLite consensus disorder prediction 256 288 - -
Sto6g2801 598 MobiDBLite consensus disorder prediction 528 548 - -
Sto6g2801 598 MobiDBLite consensus disorder prediction 493 509 - -
Sto6g2801 598 Pfam BAH domain 77 183 IPR001025 GO:0003682
Sto6g2801 598 SMART BAH_4 75 192 IPR001025 GO:0003682
Sto6g2801 598 MobiDBLite consensus disorder prediction 462 509 - -
Sto6g2801 598 MobiDBLite consensus disorder prediction 521 555 - -
Sto6g2801 598 Gene3D - 46 191 IPR043151 -
Sto6g2801 598 Pfam Agenet domain 303 379 IPR008395 -
Sto6g2801 598 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 31 597 - -
Sto6g2801 598 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 31 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2801 Sto-Chr6 35236713 35239457 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2801 - - gmx:100306709 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2801 6 35236713 35239457 Sto6g2801 6 35236713 35239457 ECH