Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2480 ATGGCCGTAGCACTAGTTGTAGCTGCAGCATTAGTATCATTCAATATTTTAAGCACCAAAGTCACAGCATGCCCCTACACTTCCATCTTCAGCTTCGGTGACTCCATCGCTGATACTGGAAACCTGTATTTCAGTTCCCAGCCACCGCCGTTGAATCGTTGCTTCTGCCCGCCGTACGGACAAACCTACTTTGGTCACTCCACCGGACGCTGCTCCGATGGCCGTCTTATCATCGATTTCATCGCTGAGTCTCTTGGGATTCCACTGGTGAAACCATATCTGGGAATCAAGAATGGAGAGGTGAAAAATTGGAAGACAGAAGAGGGAGTGAATTTTGCAGTTATAGGAGCTACGGCATTGGATGTGGATTTCTTTGAAGAGAAGGGTATTCATAATGTTCCCGTCAATGATTCTCTCACAATTCAATTGGGTTGGTTCAAGGAATTACTGCCTTCTTtgtgctcttcttcttcttcaaGATGCAAGAAAGTTCTTAGGAACTCATTATTTCTAGTGGGAGAGATTGGAGGCAACGACtttaattatctattatatctaAGAAAAAGCTTAGCAGACTTGGAAACTTACGTGCCCTTTGTGATTAATGCAATCTCTTCTGCAGTTAGTCCCTCACGAACGAGTCACGcctttcttcctcttccagCCCTCACGAGTCACGAGTCACGAGTCAcgcctttctttctcttccagcCCTCACGCCGTCACGCGGTCACGCACGTCGCACGCCTCGGCCTCATGCCTCTGCCTGTGCCTCTTCCTCTTCCAGCCCTCGGCCTCACGcctttcttcctcttccagCCCTCATGCTCACGTCGCACGCCTCGGCCTCACGCTCACGCCTCACGCCTCGACACTCGACAGTCACCGACTCACCGTGACCGACTCACCGTGATTCCGATCTGTCGAGTAGCAAGTCGTTCCGTTCCGCCGTTCAAATTTCAGTTCCGatctctcttttctctcctcCGATTCCGTGACCGtgagctctctccctctctttcttttgCTTTCGTTTTCAGTTGCTGGTTTTATGCCCTCTCCTCCGATTCCGTGACCGAGCTGATTAATTTAGGGGCTGAAACACTTATGGTTCCGGGAAATTTTCCATTGGGTTGCAATGCAATATATTTAACAATGTACGAAAGCCAAGATAAGGAGGATTATGATGAAGCTGGTTGCTTGAAGTGGTTGAACAATTTTGCTGAATACTACAACGAGAGGCTAAAAGCTGAATTGAATCACCTTCAAATGCTTCATCCCAACATTAATATCATCTATGCTGATTATTACAATGCTGCATTACCATTATATCACTCTCCCACAAAATAtgGTTTTACAGGTCTCAAAGCTTGTTGTGGAAGTGAAGGTCCATACAATTGGAATGGTTCAGAAGCATGCGGGAATGGAGTAGTGAGTGCGTGCGATGATCCTTCAAAGTACATCAGCTGGGATGGTTTGCATTTAACAGAAGCAGCGTATAGATGGATTGCCAAAGCATTACTAAATGCTCCCTACGCTTTTCCAATTCCAACATTTGATTGGCTTGTGACATCCAGTTCAGTAATCCAAACTGGTGAGCCAGAGGCAGCAAGAGCATCAATAGAAGCTCTCATGGACCCATCTGGGTTGGTAGTGTGGGTCGTCCCAGAAGACATTGTGGCCACGAACTGCTATGTTGTGTTGGTGGGCAAACTTGAGCATGGCATCAGCAATGGAGTAGTCCTCTTTGCCCTGTGTGGCTGTGTTGGTGAGGATGTGGTTGTTTATGGCACTGCCAAATGGGAAGCCTGCCTTCTTCTGCTCAAAGGATATGGTTGCATTTGGCAAGGGATTGCCTCTTTGGTCAATTGCTTGGATTAA 1881 0.4386 MAVALVVAAALVSFNILSTKVTACPYTSIFSFGDSIADTGNLYFSSQPPPLNRCFCPPYGQTYFGHSTGRCSDGRLIIDFIAESLGIPLVKPYLGIKNGEVKNWKTEEGVNFAVIGATALDVDFFEEKGIHNVPVNDSLTIQLGWFKELLPSLCSSSSSRCKKVLRNSLFLVGEIGGNDFNYLLYLRKSLADLETYVPFVINAISSAVSPSRTSHAFLPLPALTSHESRVTPFFLFQPSRRHAVTHVARLGLMPLPVPLPLPALGLTPFFLFQPSCSRRTPRPHAHASRLDTRQSPTHRDRLTVIPICRVASRSVPPFKFQFRSLFSLLRFRDRELSPSLSFAFVFSCWFYALSSDSVTELINLGAETLMVPGNFPLGCNAIYLTMYESQDKEDYDEAGCLKWLNNFAEYYNERLKAELNHLQMLHPNINIIYADYYNAALPLYHSPTKYGFTGLKACCGSEGPYNWNGSEACGNGVVSACDDPSKYISWDGLHLTEAAYRWIAKALLNAPYAFPIPTFDWLVTSSSVIQTGEPEAARASIEALMDPSGLVVWVVPEDIVATNCYVVLVGKLEHGISNGVVLFALCGCVGEDVVVYGTAKWEACLLLLKGYGCIWQGIASLVNCLD 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2480 626 CDD SGNH_plant_lipase_like 27 511 IPR035669 -
Sto6g2480 626 Pfam GDSL-like Lipase/Acylhydrolase 356 506 IPR001087 GO:0016788
Sto6g2480 626 Pfam GDSL-like Lipase/Acylhydrolase 29 208 IPR001087 GO:0016788
Sto6g2480 626 Gene3D SGNH hydrolase 351 513 IPR036514 -
Sto6g2480 626 Gene3D SGNH hydrolase 17 279 IPR036514 -
Sto6g2480 626 PANTHER - 10 209 - -
Sto6g2480 626 PANTHER - 355 515 - -
Sto6g2480 626 SUPERFAMILY SGNH hydrolase 401 509 - -
Sto6g2480 626 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 355 515 - -
Sto6g2480 626 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 10 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2480 Sto-Chr6 31734400 31748104 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2480 361 510 Acyl Lipid Metabolism Gene Families AT4G10950 29.605 1.90e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2480 - - gmx:100816865 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2480 6 31734400 31748104 Sto6g2480 6 31734400 31748104 ECH