Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g1184 ATGCGTGGTGGCGAAGATTGTGTATGTTTCAGTAAGAGTCGATCAACGAAGCTAGAGCGTGAGGCAGAGAGTCCGTCGATTCTCCGCCGTACGAATACGTCGTCGGCGCCGTTGATCTCACCGGAGAATGGGGTTACTATTGGATCCAACGGAAGCAGAGTGCGTGGTGAAATTGATGAGAGGGCTAGCGTAGCGGAACCAATCTACAAGGCAAGTTCATCAATAGCATATTTGATTATGGGATCATACTGCTGCTTTAAGTGTCAGAATCTTATTGCTTTCCATGATGATATCGTTTCCAAAGATTTTCagGCAAGAAGTGGGAGAGCATTTCTATTTGGTCATGCCATAAACATAAAAGAAGGTCCCAAGGAGGATAGGCAGCTTATAACTGGTCTTCACACAGTTTCTGATGTATACTGCTCTGATTGTGGAGAAGAATTGGGATGGAAATATGTGAGAGCCTATGAGGCATCCCAAAAGTACAAAGAGGGCAAAATCATACTAGAGAAATTCAAGATTGTTAGAACAAATCATTGTTAG 543 0.4328 MRGGEDCVCFSKSRSTKLEREAESPSILRRTNTSSAPLISPENGVTIGSNGSRVRGEIDERASVAEPIYKASSSIAYLIMGSYCCFKCQNLIAFHDDIVSKDFQARSGRAFLFGHAINIKEGPKEDRQLITGLHTVSDVYCSDCGEELGWKYVRAYEASQKYKEGKIILEKFKIVRTNHC 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g1184 180 ProSiteProfiles Yippee domain profile. 81 178 IPR034751 -
Sto6g1184 180 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 83 178 IPR039058 -
Sto6g1184 180 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 83 175 IPR004910 -
Sto6g1184 180 PANTHER PROTEIN YIPPEE-LIKE 83 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g1184 Sto-Chr6 11327395 11329855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g1184 - - gmx:100788878 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1184 6 11327395 11329855 Sto9g2722 9 29110835 29112161 ECH
Sto6g1184 6 11327395 11329855 Sto5g1310 5 8947263 8948941 ECH
Sto6g1184 6 11327395 11329855 Sto6g1184 6 11327395 11329855 ECH