Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1910 ATGGAGGCGGCGCCATTTGCTTCTGCTTCGCGCCCCGGCTCGCTCGGCTCATCGTCCTCCTCGTGCATTTTCCGGAGCTCTTCGTCCTCTCTATTACTTCTTCGGAACAAAGTTTCCTTGAGAAATCATTCTGCTCGCACCAAATACTCCCGGAACTTCTCGGTCCGCGCCTCCTCTTCTGGGGATTCCGTCGTGACTCTTCTTGATTATGGTGCTGGCAATGTTCGAAGTGTTAGGAATGCTATCCGACACCTTGGATTTGACATCAAAGATGTGCAAACTCCCGAAGATATTTTAAATGCAAACCGCCTAATCTTTCCAGGTGTTGGAGCATTTGCCCCTGCCATGGAAGTGTTGAACAAGACTGGGATGGCTGAAGCATTATGTTCATATATTGAGAAAGACCGGCCATTTCTAGGCATTTGTCTTGGACTTCAATTACTTTTTGAATCTAGTGAGGAGAATGGACCAGTAAAGGGTCTAGGCTTAATACCTGGAACTGTTGGGCGGTTTGACTCATCAAATGGTTTTAGAGTACCACATATTGGCTGGAATGCTTTACAAGTCACAATGGACTCAGACATTTTGGATGAAGTTGGAAACCATCATGTCTATTTTGTGCACTCTTATCGTGCCATGCCATCAGATGACAATAAAGAGTGGATATCCTCCACCTGCAATTACGGTGGCAAGTTTATAGCATCTATTAGAAGAGGAAATGTGCATGCAGTTCAGTTCCATCCAGAAAAGAGTGGAGATGTTGGTCTTTCTGTTCTAAGAAGATTCTTGTATCCAAAGTCAAACATGGCAAAGAAGACTGGTGAAGGCAAGGCTTCAAAACTTGCAAAAAGGGTGATTGCTTGTCTTGATGTGAGGGCAAATGATAAAGGGGACCTTGTTGTGACCAAAGGAGACCAGTATGATGTAAGAGAACAGACAGAGGATAATGAGGTAAGGAATCTTGGCAAGCCAGTTGATCTTGCCAGACAGTACTATAAGGATGGTGCTGATGAGGTGAGCTTTCTAAACATCACTGGTTTTCGTGACTTCCCTCTTGGTGATTTGCCAATGCTGCAGGTATTGCGATACACATCAGAAAATGTCTTTGTACCCTTAACTGTTGGGGGCGGGATTAGAGATTTTACAGATTCAAATGGCAGGCACTATTCTAGTTTGGAAGTTGCTTCAGAATATTTTAGATCTGGGGCCGATAAAATTTCTATTGGAAGTGATGCAGTTTACACTGCAGAAGAGTATCTAAGAACTGGAGTAAAGACTGGGAAGAGCAGCTTAGAACAGATATCTAGAGTATATGGGAATCAGGCTGTCGTGGTCAGTATAGATCCTCGCAGAGTTTACGTAAAGAATCCCAATGATGTGCAATTCAAGACCATAAAGGTGTCAAGTCTAGGTCCAAAAGGAGAAGAATATGCCTGGTATCAGTGTACAGTTAATGGGGGGCGAGAAGGCCGGCCAATTGGTGCTTATGAGCTAGCAAAGGCAGTTGAAGAGCTTGGTGCTGGAGAAATACTACTTAACTGCATTGACTGTGATGGTCAGGGAAAAGGATTTGATATAGATCTAATCAAGTTGATTTCAGATGCTGTAAGTATCCCTGTGATTGCAAGTAGTGGGGCTGGTACTGTTGATCACTTTTCTGAGGTGTTTGCCAGAACGAATGCATCTGCTGCACTTGCTGCTGGCATTTTTCATAGGAAGGAGgtGCCTATTCAGTCCGTAAAAGAGCACTTGTtgaaagaaaatatagaagTCCGAATCTGA 1782 0.436 MEAAPFASASRPGSLGSSSSSCIFRSSSSSLLLLRNKVSLRNHSARTKYSRNFSVRASSSGDSVVTLLDYGAGNVRSVRNAIRHLGFDIKDVQTPEDILNANRLIFPGVGAFAPAMEVLNKTGMAEALCSYIEKDRPFLGICLGLQLLFESSEENGPVKGLGLIPGTVGRFDSSNGFRVPHIGWNALQVTMDSDILDEVGNHHVYFVHSYRAMPSDDNKEWISSTCNYGGKFIASIRRGNVHAVQFHPEKSGDVGLSVLRRFLYPKSNMAKKTGEGKASKLAKRVIACLDVRANDKGDLVVTKGDQYDVREQTEDNEVRNLGKPVDLARQYYKDGADEVSFLNITGFRDFPLGDLPMLQVLRYTSENVFVPLTVGGGIRDFTDSNGRHYSSLEVASEYFRSGADKISIGSDAVYTAEEYLRTGVKTGKSSLEQISRVYGNQAVVVSIDPRRVYVKNPNDVQFKTIKVSSLGPKGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDIDLIKLISDAVSIPVIASSGAGTVDHFSEVFARTNASAALAAGIFHRKEVPIQSVKEHLLKENIEVRI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1910 593 SUPERFAMILY Ribulose-phoshate binding barrel 280 592 IPR011060 -
Sto5g1910 593 SUPERFAMILY Class I glutamine amidotransferase-like 64 264 IPR029062 -
Sto5g1910 593 TIGRFAM hisF: imidazoleglycerol phosphate synthase, cyclase subunit 281 592 IPR004651 GO:0000105|GO:0000107
Sto5g1910 593 CDD GATase1_IGP_Synthase 65 263 IPR010139 GO:0000105|GO:0016763
Sto5g1910 593 ProSiteProfiles CobBQ-type GATase domain profile. 62 255 - -
Sto5g1910 593 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 64 272 - -
Sto5g1910 593 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 76 593 - -
Sto5g1910 593 PIRSF IGPS_HisHF 62 593 IPR014640 GO:0000105|GO:0000107|GO:0016763|GO:0016833
Sto5g1910 593 Pfam Histidine biosynthesis protein 284 575 IPR006062 GO:0000105
Sto5g1910 593 Gene3D Aldolase class I 286 593 IPR013785 -
Sto5g1910 593 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF 76 593 - -
Sto5g1910 593 TIGRFAM IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 65 263 IPR010139 GO:0000105|GO:0016763
Sto5g1910 593 Pfam Glutamine amidotransferase class-I 67 262 IPR017926 -
Sto5g1910 593 Gene3D - 61 285 IPR029062 -
Sto5g1910 593 CDD HisF 283 587 IPR004651 GO:0000105|GO:0000107
Sto5g1910 593 Hamap Imidazole glycerol phosphate synthase subunit HisH [hisH]. 64 265 IPR010139 GO:0000105|GO:0016763
Sto5g1910 593 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1910 K01663 - qsu:111998074 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1910 5 14203178 14211740 Sto5g1910 5 14203178 14211740 ECH