Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1903 ATGGATCTGGAGGTAATTGGCCGCCATGCGCTACTCTTCGACGACGACTCCATGGCCGCGTTTGTGAACACGAGCGAAGCTCTTGTTGAATGGAACTCTCTCTCGATCGACCGTTACGACGTCCGCCACCTCCTCACTGGCCCTCTTCCGCCGCGCCTCAAGCGCCGGCCGGTTCATCACCTCGATGCCGCTGCTGCTTCTCTCGAGGCAGACCTCGATTATGAACGCTATCTCGATCTACCTTCATCATCTTCCGACGAGCAAGAGCAAGAACATTTCAAATCTCGTTCGTGTCTTGATGAGTGCGCAATGCGCAATGGCTCCGCCCTTTTCGCAACAGTGCGCCATAATGGTTCTGAGCCAGTGATTTCTGGTGGCTATAATGCTGTAGCATTCTCATATGGAAATTCTGGAAAGACCACCGAGACAAAGAACAATGATACTGAGTCTGGTTTTCATCCACACTTCTCAGTGCCTGAGAGCTTACTCCAAAACCTGcCTCCAAATGAGAAGGTGCATCAGATTATTGCGAGAACAGCTATGTTTGTCAGTAAGCATGGGGACCAATCAGAAATTATTCTGAGGGTGAAACAAGGAGATAATCCAAAATTTGGGTTCTTGATGCctgatcatcatcttcatccgtACTTCAGGTTTCTTGTCGATCATCAAGAACTTTTGGAACCTGGCATTGATGATGGCAACTCATCTGTGGACAAGAATGAAAGTCAGGGGCTTGATCAAACTGGCGGTGCCTTGTCTTTGCTTGGATCCATCTATGGAACAGGAGAGGATGAGGATGGTGCCACTGAGAAAACTCCTGAATTTAAAAGAAGTAAAAGTGAGGAAGCTATTGGCGTAGTCAAAAACTCTACTTCTCAAGGAGCAGAGCAGGCTGAATCTTTTCAGGATCCAGTCAAGAAGGATGGAGGTACTTGCAAGAATTCAATATCCACTTCAAAAGAAAAAGTTCCTGTCATAAAGAGGAATCATTCTATCAATTCTATTAAGGCTGCAACCACAGCAAAGGTGAAAAAGGCTGATGCCTTGGGTTCTTTGCCCAATGTGGTGGAGAAATCACTTGCTTCTTTGTCTAGTACAACCAAGATTGAGCAACCTATTGTGGAACCTCCATCTGACCTAAAGAGGGTTATTGAGAAGATAGTTGAGTTCATCTTTAAAAATGGCAAAGAATTTGAGGCTGTTCTTGCTGAACAAGACCGTGCCCATGGAAGGTTCCCATTTCTTGTGCCATCTAATCAATACCATCCTTACTATTTGAAAGTTCTTCAAAATGCTCAAGAGCCTAAGTTGGCGAGTAAAGGCTACCTCCCTGAGAAACACAATCCAGTAGGCCGTGTGGGGGACAAGAAATCTGCCTCAAAGAAAGAAAGTGACAACATTTCAGTTGGATCTGTGGGCTCTGATATACCCTATGATATTGACCGGAAAGAAAAGTTCAAAATGGTTATTGGCAAATCAAAGAAGGATGGACAAGAGCCAATTTCCAAAGACAACCAGCCTCAGGTTGGAGTCAGTATGGATGCTGCAGCGGCAGCAGCTATTCTTCAGGCTGCCACTAGGGGTATTAAAAATCCTTGTTTAGAAATTTTTACGAAGACCTCAAGTGGTAATGGTCAAGGATTGTCCAGTTATGGTAGTCTGCATTCATCTCAGCCACAGAGTTCTGTCCAGAAGTCAAAGCACAATGCAGAGGCTAGTGTTTCCGTCCCTGTAGCCAAGGTTATTGCGGAGACAGCGGCTATTGCAGCAGCAGGTGAGGCTGACTCCTCCGAAGCATGCATGTCGAAAGAGCAGAAACTTAAAGCAGAGAGATTGAAACGAGCAAAGATGTTTGCAGCCATGATAAAAAGTGGAACTGCACCACCGAGAAGTGAACCGATTCGAGGTTTATCAGTTGAGCCACCTGGATCTGGAATGTCAGGTTTGGGTGCTGAGGTTGGGAATCTCGTAGGCAAGGAAAGGGAAGGCAGTTCTGTTCCATTCGATGTTGATAATTCAGATAAAAGTCTCAAGTCTGAGGAGAAACTTTCTATTGATAGTACTGAAAGGAGATCGAAACGCAAGTACCGCTCAAGATCCAGTAGACAtgaagaggaggaagagaaagaagatgaaAAGGATCACAAACGTTCCCGAAGAAAGCACAGATCTCATAGGTCTTCGCACAGCCGGGACAGGCATAAGCACAAGAGAAGAGATTCCTCCTCTAAGGACAAGAGTGCCAAGGGGACTAAACACGATAGCTCCTCCGATGATAACACTCATCACCCGAGGCATTTTCATACATTGGATAGCTCCTCCGACGAAAAGAATCACACTTCTCGACGACGGCATAGAAGAGATAGTAGCTTGTCCGATAATGAGCGAAAACATTCTCAACGGCGGCGCAAGGATTATAGTTCGTCCGATGATGAgcatcggcacagacacaaaaCTGTGAAGCGTAGAAGTAGATCTCATGCCGAAAGAGAGGCAGTCTATCTAGGGGAAAGTCATGTTAAAGTCTTCAAGAAGCTATTTGTCAAACTAAGAGCATTCAAGCTGCGACTCAATCCCAACAAGTGTGTCTTCAACACCTCATCTGGAAAGCTCCTAGGATTTATAGTTGGCCAGAAGGGCATTGAGCATAGTTTCTGCAGTTCTTCACTAGAGGTTCCgcaagagattcgacccttgATCATGATGCACTTATTGGTTACTGTGATGCCTGACAAACCCAATGAGAAGCCCAAAGACACTTACCCGATAGACGAGGACACCAGAGCTGAGGAGAACCACTTGGGCCAGAGTTGTGAGCCCAATGTCGAGGCTGAGAAGGAAGCAACGGGAGTGGGCCCTGGAGTAGCATCAGTTGCACGCACTTGA 2889 0.4476 MDLEVIGRHALLFDDDSMAAFVNTSEALVEWNSLSIDRYDVRHLLTGPLPPRLKRRPVHHLDAAAASLEADLDYERYLDLPSSSSDEQEQEHFKSRSCLDECAMRNGSALFATVRHNGSEPVISGGYNAVAFSYGNSGKTTETKNNDTESGFHPHFSVPESLLQNLPPNEKVHQIIARTAMFVSKHGDQSEIILRVKQGDNPKFGFLMPDHHLHPYFRFLVDHQELLEPGIDDGNSSVDKNESQGLDQTGGALSLLGSIYGTGEDEDGATEKTPEFKRSKSEEAIGVVKNSTSQGAEQAESFQDPVKKDGGTCKNSISTSKEKVPVIKRNHSINSIKAATTAKVKKADALGSLPNVVEKSLASLSSTTKIEQPIVEPPSDLKRVIEKIVEFIFKNGKEFEAVLAEQDRAHGRFPFLVPSNQYHPYYLKVLQNAQEPKLASKGYLPEKHNPVGRVGDKKSASKKESDNISVGSVGSDIPYDIDRKEKFKMVIGKSKKDGQEPISKDNQPQVGVSMDAAAAAAILQAATRGIKNPCLEIFTKTSSGNGQGLSSYGSLHSSQPQSSVQKSKHNAEASVSVPVAKVIAETAAIAAAGEADSSEACMSKEQKLKAERLKRAKMFAAMIKSGTAPPRSEPIRGLSVEPPGSGMSGLGAEVGNLVGKEREGSSVPFDVDNSDKSLKSEEKLSIDSTERRSKRKYRSRSSRHEEEEEKEDEKDHKRSRRKHRSHRSSHSRDRHKHKRRDSSSKDKSAKGTKHDSSSDDNTHHPRHFHTLDSSSDEKNHTSRRRHRRDSSLSDNERKHSQRRRKDYSSSDDEHRHRHKTVKRRSRSHAEREAVYLGESHVKVFKKLFVKLRAFKLRLNPNKCVFNTSSGKLLGFIVGQKGIEHSFCSSSLEVPQEIRPLIMMHLLVTVMPDKPNEKPKDTYPIDEDTRAEENHLGQSCEPNVEAEKEATGVGPGVASVART 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1903 962 MobiDBLite consensus disorder prediction 545 570 - -
Sto5g1903 962 MobiDBLite consensus disorder prediction 625 832 - -
Sto5g1903 962 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 1 830 IPR040397 -
Sto5g1903 962 MobiDBLite consensus disorder prediction 450 464 - -
Sto5g1903 962 SMART DRY_EERY_2 1 138 IPR019147 -
Sto5g1903 962 Pfam Surp module 383 431 IPR000061 GO:0003723|GO:0006396
Sto5g1903 962 Pfam Surp module 174 222 IPR000061 GO:0003723|GO:0006396
Sto5g1903 962 Gene3D - 807 884 IPR043128 -
Sto5g1903 962 MobiDBLite consensus disorder prediction 665 718 - -
Sto5g1903 962 SUPERFAMILY Surp module (SWAP domain) 151 222 IPR035967 GO:0003723|GO:0006396
Sto5g1903 962 PANTHER SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG 1 830 - -
Sto5g1903 962 Gene3D Surp module 168 223 IPR035967 GO:0003723|GO:0006396
Sto5g1903 962 SMART surpneu2 382 435 IPR000061 GO:0003723|GO:0006396
Sto5g1903 962 SMART surpneu2 173 226 IPR000061 GO:0003723|GO:0006396
Sto5g1903 962 MobiDBLite consensus disorder prediction 912 962 - -
Sto5g1903 962 MobiDBLite consensus disorder prediction 261 280 - -
Sto5g1903 962 ProSiteProfiles SURP motif repeat profile. 175 217 IPR000061 GO:0003723|GO:0006396
Sto5g1903 962 ProSiteProfiles SURP motif repeat profile. 384 426 IPR000061 GO:0003723|GO:0006396
Sto5g1903 962 Pfam Alternative splicing regulator 2 136 IPR019147 -
Sto5g1903 962 Gene3D Surp module 368 439 IPR035967 GO:0003723|GO:0006396
Sto5g1903 962 MobiDBLite consensus disorder prediction 441 469 - -
Sto5g1903 962 SUPERFAMILY Surp module (SWAP domain) 371 431 IPR035967 GO:0003723|GO:0006396
Sto5g1903 962 MobiDBLite consensus disorder prediction 265 280 - -
Sto5g1903 962 MobiDBLite consensus disorder prediction 290 317 - -
Sto5g1903 962 SUPERFAMILY DNA/RNA polymerases 838 887 IPR043502 -
Sto5g1903 962 MobiDBLite consensus disorder prediction 744 816 - -
Sto5g1903 962 MobiDBLite consensus disorder prediction 719 743 - -
Sto5g1903 962 MobiDBLite consensus disorder prediction 913 934 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1903 - - gmx:100791165 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1903 5 14116331 14128395 Sto5g1903 5 14116331 14128395 ECH