Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1892 ATGGAGCTTTGCAGTGGAAGCTTCAGGACTATCCTCAATTTCAATCCCTCTCCACCtcgtctctctctcctttcttcCAATTCTCTTTCTCTACGAAATTCATTTCTCCACTGTAAGCCTAGAACTTCCAATTCTCTGAGGcattcctcttcctcctcccgCCAAATCCAGCTCTTTCAACCTTCTTTACATCGTCGTCACAATTCGCGCCGCCTTACAGTTTCGGCTTCGTCTTCCGTCGCTGTTGGAACCGAAGAAGACCGGCTTCCCGCAGATTTGAATGTCACTGAGACGGAAAATCCGAATTCCAGTGTAGAATTTGATACGGTTAAATTGCACGTAGAAGTTCCTTCTCTGGTATGTGAGGATTGTTACAAAAGGGTCATAGCTGAGTTTACGAAGCAAGCAAAGatACCTGGTTTTCGCCCTGGAAAGAAGGTTCCAGAGAGTATTCTTATTAATTATGTTGGGAAGAAAAATGTTCAGAAGGCGACAATTGAATCTATACTGAGGAGGACACTTTCACATGCCATGTTGAGTGTTTCAGGAAAGGCTTTGCAGGACTCAGTACGTATAGTAACTAGATTTTCTGAGTTAGAGGAAACATATTCTTCGCTTGGGTCTCTCAGATATGATGTCATTGTTGATGTTGCACCTGAAATCAAATGGAATCCTGAGAATGCGTACAAAAATATGAAGATAGTTGTTGAAATAGACAGTGAAATAGATGCTCACATAGCATCTGAGCAAGAATTACGAAGACGCCATAAGTCCACTGGTCCACTAAAAATTGTTACTGACAGAGGGCTACAGATTGGTGATGTAGTTGTCCTTGACATCTCAGCAAAAACAATTGATCAAGATGAATCAAATATCAAAGATATTCCATCTGCTGAAAGTAAAGGGTTTAATTTTGACACAGAAGATGGTGACAAAGTACTACCCGGTTTCCTTGATTCTATTATTGGAATTTGTGCTGGTGAAACAAAGTCATTTCCTCTTGTATTTCCTGAAACATGGAAGCAAGAGAGTCTCCGTGGCATTCATGCTCAATTTACTGTTGAATGCAAAGAACTTTTTTACAGAGATTTACCTGAGTTAAATGATTCTATTGCCGATAAACTTCTCCCGGGATGCACCACAGTGGAGCAGGTCAAAGAAATATTGTTACAGAAATTTCAAGAAGTGGAGAAGACAGCTAGAGAACAAGCAACTGATAATGCTATCCTAGATCAGCTTTCTAAGATGGTAGAAGTTGATATACCTCAATCATTGTTTGAGGAACAAGGTAGGCAGCTTTATGGAGCCAGCCTATTAGAAATTCAGGCTAATGTAAAACTAAATGAGCAGCAGTTGGCTTCTCTATCAAGTCCAAAGGCAGTGAATGAATATCTTGAACACCAAAAAGACAATATAACTAGGTTGATAAAACAGAATCTGGCAGTTGGAGACATATATAGGCGTGAAAATTTGCAGTTTTCTACGGATGATCTTGTCAAAGAGGTTGAGAATTCCATAGCTGAATTTAAGCGTCAAAATCAAGAATATGATGAGGAACGGGTGAAGGATCAGGTGCAAGAGATACTAGAAGGAGCCAAGGTGCTTGAATGGTTAAGAGAACACGCAGAGATTCAGTATATAACCAGATGA 1650 0.3897 MELCSGSFRTILNFNPSPPRLSLLSSNSLSLRNSFLHCKPRTSNSLRHSSSSSRQIQLFQPSLHRRHNSRRLTVSASSSVAVGTEEDRLPADLNVTETENPNSSVEFDTVKLHVEVPSLVCEDCYKRVIAEFTKQAKIPGFRPGKKVPESILINYVGKKNVQKATIESILRRTLSHAMLSVSGKALQDSVRIVTRFSELEETYSSLGSLRYDVIVDVAPEIKWNPENAYKNMKIVVEIDSEIDAHIASEQELRRRHKSTGPLKIVTDRGLQIGDVVVLDISAKTIDQDESNIKDIPSAESKGFNFDTEDGDKVLPGFLDSIIGICAGETKSFPLVFPETWKQESLRGIHAQFTVECKELFYRDLPELNDSIADKLLPGCTTVEQVKEILLQKFQEVEKTAREQATDNAILDQLSKMVEVDIPQSLFEEQGRQLYGASLLEIQANVKLNEQQLASLSSPKAVNEYLEHQKDNITRLIKQNLAVGDIYRRENLQFSTDDLVKEVENSIAEFKRQNQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYITR 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1892 549 Gene3D - 94 221 IPR036611 GO:0006457|GO:0015031
Sto5g1892 549 Hamap Trigger factor [tig]. 98 545 IPR005215 GO:0015031
Sto5g1892 549 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 367 545 IPR027304 -
Sto5g1892 549 Pfam Bacterial trigger factor protein (TF) C-terminus 381 538 IPR008880 GO:0006457|GO:0015031
Sto5g1892 549 SUPERFAMILY Trigger factor ribosome-binding domain 109 236 IPR036611 GO:0006457|GO:0015031
Sto5g1892 549 TIGRFAM tig: trigger factor 110 538 IPR005215 GO:0015031
Sto5g1892 549 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 76 548 - -
Sto5g1892 549 SUPERFAMILY FKBP-like 265 368 - -
Sto5g1892 549 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 76 548 IPR005215 GO:0015031
Sto5g1892 549 Gene3D - 228 544 IPR037041 GO:0006457|GO:0015031
Sto5g1892 549 Gene3D - 258 365 IPR046357 GO:0003755
Sto5g1892 549 Pfam Bacterial trigger factor protein (TF) 109 242 IPR008881 GO:0006457|GO:0015031
Sto5g1892 549 Coils Coil 499 519 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1892 K03545 - gmx:100812597 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1892 5 13942402 13948871 Sto5g1892 5 13942402 13948871 ECH