LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g1882	ATGTGGAACTCACGCGCTCTCTCTCGTATACTCGCTCTGCTTCTTCTTCACTCGGTGGTAGCTCTGGTCTCTGCTCAGGGATCTACTAAAAGCACTTGGAATACACTGAGTGGTGCTTTCTGCGCGGCTGCTCTGGAAATGCACAAAGGATACGAGGAGATTGAGCGTCTCCGTCGTGTGTTTGTGCTTTCTTTTATTCGTTTGTGTTCATCGATTTATGGAGAATGCGAGGCTCGCCTTGAGTTGCTAGAGTGTTATCTTGTTCTTGGAAGTGCACCATTAGTTGTAGCACGGGGAGGGTTTTCAGGGTTATTTCCTGATTCCAGCCTGGCTGCTTATAATTTGGCATTAATAACCGGCCTACCAAATGTTGTTTCGTGGTGTGATGTGCAATTAACAAAAGATGCAGCTGGGATTTGTTTTCCAGATGTCAAGCTTGACAATGCTACTGACATTTCAAGCATTTTAGAGAATAAAACCACCACTTACTTAGTTAATGGTGTACCAACCAAGGGATATTTTTCGGTGGATTACACTCTGAAGGATCTAACCCAAGTTGTCTTGACTCAGGGAGTTTACTCTCGAACTAACAAGTTCGATGGGAATTTATTTCCAATTTTTACTGTTGATGATCTAGTCAAACAAGTTGCCCCACCATTCTTGTGGTTGAATGTTCAGCATGATGCTTTCTACACGCAACACAATTTGAGTATGAGAAACTTTGTACTTTCTATTTCTAGAAAGGTAGTTGTCAATTATATCTCATCACCTGAGGTTGGTTTTCTGAGAGGCATATCAACACGCTTCAACCCAAACATAACTAAACTGGTCTTCAGATTTATGGGAATGGATGAAGTTGAACCTACAACCAAACAGACTTATGACTCACTACAAAAGAATCTTACATTTATCAAAACATTTGCTTCTGGAATTTTAGTTCCCAAGAATTACATATGGCCCGTCGATTCTGGTTCTTATCTACAACCACATACCTCTTTGGTCTCAGATGCTCACAAAGTGGGACTAGAAGTTTTTGCATCCGATTTCGTGAATGATCTTCCAATTAGCTACAATTACAGTTATGATCCTCTTGCCGAGTACCTCCAATTCATTGACAATGGTGAATTCTCTGTTGATGGTGTGCTGTCTGACTTCCCTATAACTCCATCTGAAGCTGTAGACTGCTTTGCTCACCTAGGCGGAAATGCCACGAAACAAGTTAACACTTTGGTCATCTCAAAATATGGAGCAAGTGGAGACTATCCTGCCTGTACTGACTTGGCATACCAGAATGCCATATCAGATGGTGTGGATGTTCTTGACTGCCCTGTTCAAATGTCAAAGGATGGAACACCATTTTGCTTAAGCTCCATCGATCTTATAGAGAGCACAACAGTTGCTCAATCAAGTTTCAGCAGACTTGCCACATCTATTCCTGAGATCAAGTCTGGCAGTGGAATATTTTCATTCAGTTTGACATGGGATGACATAAAAACCTTGAAACCATCGATTTTGAACCCTTACACAAAATACAGATTGTACAGGAATCCAAAATTTAAGAATGAGGGGAACTTCGTAACATTGTCAGATTTCTTGTCCTTGGCAAAAAATCAAACTTCTTTGTCTGGTGTCATGATTACTGTTGAGGACAATTTCTACACCTCCTCTGAAGAGGCAACATTCTTGACTATTGGCAGTCTTGCTCCATGCATGCTCACTCTGGCTCCCACCGTACCCTTGGACTGGGTAGGTCACAGTGTCACACCCTCTTCTGTAGCACTTTTCATGCAGAATGCAGCCTATCTTGCAGAGAAGGTTGGATTAAGTATTACTGATGCAGTCCTGACTGCTTTGAGCAAAGCCAGTTATGATAAGCCAGGGGCTCAAAAAGTTTTGATTCAGTCCAGTAATAGCTCTGTACTAAAGGAATTCAGGGATAAAACTAAATATGAGCTTGTCTACAAGATTGATGAGAATGTTGGTGATGCTGTTAATTCTGCTGTTGAAGAGATCAAGAGCTTTGCAGACTCTGTGGTTGTTGAGAAGGCATCTGTTTTTCCCCTGAATGCGGCCTTCTTGACTGGCTCGACGAAAATCGTGCCGAAGCTAAAATCTTATAACCTCTCTGTCTATGTAGAAACTTTCAGCAATGAGTTTGTATCGCAGGCCTGGGATTTCTTCTCTGATGCAACAGTGGAGATCAACACATTTGTTCAGGGAGAAGAAGTTGATGGTGTCATCACAGACTTCCCAAAGACTGCTAATAGATACAGAAGGAACAGGTGTTTGTCAGATAAGACCCTACCTCCTTACATGGAACCGGTTAAAGCCGGTGATCTCTTACAACTAGTAACCAAAGAGTACTTGCCACCTGCCCAGGCTCCTCTCCCACCCCTGACAGAATCGGAAGTGTCGGAGCCGCCATTGCCTGCTACTAAGGCAGCCCAAGCTCCTGGGCCTTCTAGTGGATCAAGAGGAGGAACATCTCCGCCCGGCAATGCGCAGACTAAGGTCACCATCGGCTTCTTCTTGTCCAGCCTGGCTCTGTTTGTATCTTCACTTCTGCTGTTTTGA	2574	0.4316	MWNSRALSRILALLLLHSVVALVSAQGSTKSTWNTLSGAFCAAALEMHKGYEEIERLRRVFVLSFIRLCSSIYGECEARLELLECYLVLGSAPLVVARGGFSGLFPDSSLAAYNLALITGLPNVVSWCDVQLTKDAAGICFPDVKLDNATDISSILENKTTTYLVNGVPTKGYFSVDYTLKDLTQVVLTQGVYSRTNKFDGNLFPIFTVDDLVKQVAPPFLWLNVQHDAFYTQHNLSMRNFVLSISRKVVVNYISSPEVGFLRGISTRFNPNITKLVFRFMGMDEVEPTTKQTYDSLQKNLTFIKTFASGILVPKNYIWPVDSGSYLQPHTSLVSDAHKVGLEVFASDFVNDLPISYNYSYDPLAEYLQFIDNGEFSVDGVLSDFPITPSEAVDCFAHLGGNATKQVNTLVISKYGASGDYPACTDLAYQNAISDGVDVLDCPVQMSKDGTPFCLSSIDLIESTTVAQSSFSRLATSIPEIKSGSGIFSFSLTWDDIKTLKPSILNPYTKYRLYRNPKFKNEGNFVTLSDFLSLAKNQTSLSGVMITVEDNFYTSSEEATFLTIGSLAPCMLTLAPTVPLDWVGHSVTPSSVALFMQNAAYLAEKVGLSITDAVLTALSKASYDKPGAQKVLIQSSNSSVLKEFRDKTKYELVYKIDENVGDAVNSAVEEIKSFADSVVVEKASVFPLNAAFLTGSTKIVPKLKSYNLSVYVETFSNEFVSQAWDFFSDATVEINTFVQGEEVDGVITDFPKTANRYRRNRCLSDKTLPPYMEPVKAGDLLQLVTKEYLPPAQAPLPPLTESEVSEPPLPATKAAQAPGPSSGSRGGTSPPGNAQTKVTIGFFLSSLALFVSSLLLF	857

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g1882	857	SUPERFAMILY	PLC-like phosphodiesterases	92	392	IPR017946	GO:0006629\|GO:0008081
	Sto5g1882	857	CDD	GDPD_SHV3_repeat_1	93	392	-	-
	Sto5g1882	857	SUPERFAMILY	PLC-like phosphodiesterases	409	755	IPR017946	GO:0006629\|GO:0008081
	Sto5g1882	857	ProSiteProfiles	GP-PDE domain profile.	409	758	IPR030395	GO:0006629\|GO:0008081
	Sto5g1882	857	Gene3D	Phosphatidylinositol (PI) phosphodiesterase	408	757	IPR017946	GO:0006629\|GO:0008081
	Sto5g1882	857	Gene3D	Phosphatidylinositol (PI) phosphodiesterase	91	392	IPR017946	GO:0006629\|GO:0008081
	Sto5g1882	857	MobiDBLite	consensus disorder prediction	817	833	-	-
	Sto5g1882	857	ProSiteProfiles	GP-PDE domain profile.	93	393	IPR030395	GO:0006629\|GO:0008081
	Sto5g1882	857	Pfam	Glycerophosphoryl diester phosphodiesterase family	607	753	IPR030395	GO:0006629\|GO:0008081
	Sto5g1882	857	Pfam	Glycerophosphoryl diester phosphodiesterase family	100	386	IPR030395	GO:0006629\|GO:0008081
	Sto5g1882	857	Pfam	Glycerophosphoryl diester phosphodiesterase family	416	549	IPR030395	GO:0006629\|GO:0008081
	Sto5g1882	857	PANTHER	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	89	557	-	-
	Sto5g1882	857	PANTHER	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	586	856	-	-
	Sto5g1882	857	PANTHER	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3	89	557	-	-
	Sto5g1882	857	PANTHER	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3	586	856	-	-
	Sto5g1882	857	CDD	GDPD_SHV3_repeat_2	410	757	-	-
	Sto5g1882	857	MobiDBLite	consensus disorder prediction	795	833	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g1882	Sto-Chr5	13855935	13864793	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto5g1882	90	857	Receptor kinase-like Gene Family	AT4G26690	53.255	0.0	835

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g1882	-		-	gmx:100811399	1004.59

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g1882	5	13855935	13864793	Sto5g1882	5	13855935	13864793	ECH