Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1873 ATGGCATCAAACCAGAACTTGAAAGAGCTAAAATGGGTTCTTCAAGAAATCAAATCTGAGGGCCTTAATCTGCAAAGCATTTCCTTTTACCTTTCCCAGCCAGTCTCAGCAGCCAAAACTGCTAGATTCACTCTGAGAGACCTTGAGTTTCACCGTGTCGAATGGGAGCTAGAGGAAGTGAGAAACCTCGGGATTTTGCTCGAGGATAACTCGAACATAAAACAAGTAGTTTTTCGAAGAAACCGGTTCGCGGGGAAATGCCTGCAAGAGCTTTGTGGGATTCTCAAGAGGAATAGAGTGATAAAGGAGATCATGCTTTCGGAATCGAATCTGGGGTCTGTAGGAGCAGGGCTCATTGCTTCTGCTCTCATGGTAAACCACAGCTTGGAGGAGCTGCAGATATGGGAGGACTCAATAGGATCAAGAGGTGCTGAAGAACTCTCCAAAATGATTGAAGTTAACCCAACTCTCAAGTTATTGACAATCTTTGATTCTAATGCCATCACAGCAACACCTCTTATATCTGCAGTTTTGGCAAGGAATAGAGCCATGGAAGTTCATGTTTGGAGTGGACAAAACAGTGGGAAAACCTCTAAGGTAGTCGAGTTTGTGCCCGAGAACAGCACGCTTCGGATTTACCGGCTCAATCACTCGGGTTCTTGCCGGGTTGCTTGCTCTCTGGGAATGAACTTGACAGTGAAGTCACTAGACATGACAGGAGTGAGGCTAAAATCCAGGTGGGCTAAGGAATTCAGATGGGTTTTAGAACAGAACCAGACTCTCCAAGAGGTGAACTTGTCCCAAACATGCCTAAAAGACAAGAGCATTGTATACATTGCAGCCGGACTCTTCAAGAATCGTAGTTTGCAAGCCTTAAATCTGACTGGAAATTGGTTCAGTGGGGTTGGTGTGGAACATCTACTATGCCCTTTGAGCAAATTCTCAGCCCTACAAAGTCAAGCCAACATTACTTTGAAGAATTTAAGTTTTGGAGGTGGGAGAACAAGAATAGGAAGGGATGGAGTAGCTGCTATTCTTCAGATGCTAACCAGCAACCAAAGTGTGAGCCGGTTGGGAATTCAAGATGATGAGAGTTTGCGACCGGATGACTATGTCAGAATCTTCAAGAGCTTGGAGAAGAATGCAAGCTTGAAATTCTTATCCCTGCAAGGCTGTAAAGGAGTACAAGGAGAGACATTGCTGCAAACAATCATGGAGACACTACAGATAAATCCTTGGATTGAAGATATCGATCTCTCCAGAACACCTTTACACAACTCTGGAAAGACTCAAGGGATTTATCAAAGGTTGGGTCAGAATGAGAAGTCAGAACCAGAAACGGATTTGCTCAAGGACATGCCATTAACAGAGCCCAAGAGTTGTAGAGTATTCTTCTGTGGACAAGAATCTGCAGGTAAAACCACACTTTGTAATTCAATACTGCAAAACTTCTCTGCTTCAACACTCCCCTACTTGGAACAAGTCCAAACGATGGTGAACCCGATAGAGCCGACTGTTAAAGGGATGAAGATAAAGACTTTCAAGGATGAGGACACAAAGATTTCAATATGGAACCTTTCTGGCCAGCATGAGTTTTTCTCCCTCCATGACCTTATGTTCCCCGGGCATGGAAGTGCGTCATTTTTTGTAATCATATCGAGTCTATTCAAGAAGCCAAGCAACAAAGAACTGAAAAGCACGTCAGAGATTGAAGAGGACCTGCAATATTGGCTCAGGTTTATAGTCTCCAACTCCAAAAGAGCTGTACAACAATGCATTCTACCAAGTGTGGCTGTTGTTCTTACACATTTCGATAAAATCAACCAACCTTCGCAGAACTTGCAGCTCACTGTAAATACGATTCAAAGATTGAGAGACAAGTTTCAAGGCTTTGTTGAATTCTACCCAACTGTGTTCACAGTTGATGCAAGATCATCTGCATCAGTTAGCAAGCTCACTCATCACATCCAAAAGACGTGCAAGACAATTCTCCAGAGAGTTCCTAGAGTTTACCAACTCTGCAATGATTTCATACAGATCGTATCAGACTGGAGATCAGAGAATTACAACAAGCCTGCAATGAAGTGGCAGGAATTTGAAAACCTATGCCAAGTAAAGGTTCCGCCTCTGAGAGTCCGATCGAGACACGATAACAAAGAGAGAGTCGAAATGAGAAGGCGAGCTATGGCTACTTGTCTTCATCACATTGGTGAGGTTATTTACTTCAATGAGTTGGGATTTCTAATCCTGGATTGTGAGTGGTTCTGTGGCGAAGTCCTGGGTCATCTTATAAGATTAAATGTTAGAAAACAAAACTCATTGGAAAACAATGGATTTATAAGCAGGAAGGAGCTAGAGAAAATCTTAAGAGTGAGTTTACAGGGCCCTATTCCTGGAATGGGTTCGAAGGTGTTTGAGAACTTAGAGGCCAGTGACCTTGTGAGGATGATGCTGAAACTTGAACTCTGCTATGAACAAGATCCATCAAACCCAGATTCTCTGCTATTGATTCCCTCCATGCttgaagaaggaagaggaaagCCACAGAAGTGGCAGTTGAGCACACCAGAATGCGTTTATACAGGCCGTCATCTCGAGTGTCATGATTCAAGCCACATGTTTCTAACTCCAGGATTCTTCCCTCGCTTACAGGTGCACCTTCACAACAGAATCATGGCTCTAAAGAATCAACATGGAGCAACTTACAGTCTCGAGAAGTACCTCATTTCAATCGGCATTAATGGAATCTACGTCAGAGTTGAGCTGGGAGGTCAGCTGGGTTACTACATCGACGTCCTTGCGTGCTCCACCAAGAACTTGACAGAAACCTTAAGAGTCATTCAGCAACTCGTAATCCCAGCAATTCAAAGCCTCTGCCATGGGATCACCTTGACTGAGCATGTTATAAGACCCGAATGTGTGAGAAATCTAACACCTCCAAGATACAGGAAGACTCAAATTGTTTCCCTGCAACTGCTGAAACAAGCATTGCTTTCACTTCCAGCAGATAGTATGTATGATTATCAACACACATGGAGTCCAGTGTCTGACTCTGGCAGACCGATTCTCCGAGCCGGTTTCGATTTTGCACGGGACATTCTATCCGATGATGACTTCCGGGAAGTGCTGCACCGAAGATATCATGATTTATACAATCTCTCCCAAGAGCTGCAAGTCCCACCTGAAAGCAATGGACAAGATCATTCTTTAGCCTTAAGTGAAGAAGCTCAGAGTGTAGAACCAAGCATTGGGGGAATTGCAAAAGGGGTTGAAGCAGTTTTACATAGACTGAAGATTATTGAACAAGAAATAAGAGATTTGAAGCAGGAAATCCAAGGGCTCAGATATTATGAACATAGACTCCTCCTTGAGCTTCATCACAAAGTGAACTACCTAGTCTCCTTCAATGTCCAGGTTGAGGAGAGAAAAGTACCCAACATGTTCTATTTTGTGAGAACAGAAAACTACTCAAGGAGACTGGTCACCACCATGATTTCTGGCATGACTGCTCTTCGTCTTCACATGCTATGTGAGTTCCGGGGAGAAATGCATGTTGTTGAAGACCAAATGGGTTGTGAACTTATGCAAGTTGATAACAGAGCTGTGAAGTCTTTGGCTCCACACCTTAAGAATTTCATGAAACTGATAACATTTGCTCTTAAAATAGGAGCTCACATAGCAGCTGGAATGGGAGAAATGATACCTGACTTGAGCAAGGAAGTCGCCCATTTGGCCGGCTCTTCGGCTCTGGTAGGGGCAGCAGCTGCAGGTGCTGTAGGGGTGGCAGCCATGGGTTGCAGAAACCGGGCAGCGGAAAGTTCAAGGGACACTCGACAAGATTTGAAAGCAGCACAGCAATGGGTGTTAGATTTCTTAAGGGAAAGGAGATGCTCCTCAGGGAATGATATTGCAGAGAAGTTTGGGTTGTGGCGTGTGAGGTACAGAGATACTGGTCAGATTTCATGGATCTGTAGAAGGCACATTCACACAAGATCAACAGAGATCACAGAAGTGCCCATTTGA 4023 0.4385 MASNQNLKELKWVLQEIKSEGLNLQSISFYLSQPVSAAKTARFTLRDLEFHRVEWELEEVRNLGILLEDNSNIKQVVFRRNRFAGKCLQELCGILKRNRVIKEIMLSESNLGSVGAGLIASALMVNHSLEELQIWEDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITATPLISAVLARNRAMEVHVWSGQNSGKTSKVVEFVPENSTLRIYRLNHSGSCRVACSLGMNLTVKSLDMTGVRLKSRWAKEFRWVLEQNQTLQEVNLSQTCLKDKSIVYIAAGLFKNRSLQALNLTGNWFSGVGVEHLLCPLSKFSALQSQANITLKNLSFGGGRTRIGRDGVAAILQMLTSNQSVSRLGIQDDESLRPDDYVRIFKSLEKNASLKFLSLQGCKGVQGETLLQTIMETLQINPWIEDIDLSRTPLHNSGKTQGIYQRLGQNEKSEPETDLLKDMPLTEPKSCRVFFCGQESAGKTTLCNSILQNFSASTLPYLEQVQTMVNPIEPTVKGMKIKTFKDEDTKISIWNLSGQHEFFSLHDLMFPGHGSASFFVIISSLFKKPSNKELKSTSEIEEDLQYWLRFIVSNSKRAVQQCILPSVAVVLTHFDKINQPSQNLQLTVNTIQRLRDKFQGFVEFYPTVFTVDARSSASVSKLTHHIQKTCKTILQRVPRVYQLCNDFIQIVSDWRSENYNKPAMKWQEFENLCQVKVPPLRVRSRHDNKERVEMRRRAMATCLHHIGEVIYFNELGFLILDCEWFCGEVLGHLIRLNVRKQNSLENNGFISRKELEKILRVSLQGPIPGMGSKVFENLEASDLVRMMLKLELCYEQDPSNPDSLLLIPSMLEEGRGKPQKWQLSTPECVYTGRHLECHDSSHMFLTPGFFPRLQVHLHNRIMALKNQHGATYSLEKYLISIGINGIYVRVELGGQLGYYIDVLACSTKNLTETLRVIQQLVIPAIQSLCHGITLTEHVIRPECVRNLTPPRYRKTQIVSLQLLKQALLSLPADSMYDYQHTWSPVSDSGRPILRAGFDFARDILSDDDFREVLHRRYHDLYNLSQELQVPPESNGQDHSLALSEEAQSVEPSIGGIAKGVEAVLHRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHHKVNYLVSFNVQVEERKVPNMFYFVRTENYSRRLVTTMISGMTALRLHMLCEFRGEMHVVEDQMGCELMQVDNRAVKSLAPHLKNFMKLITFALKIGAHIAAGMGEMIPDLSKEVAHLAGSSALVGAAAAGAVGVAAMGCRNRAAESSRDTRQDLKAAQQWVLDFLRERRCSSGNDIAEKFGLWRVRYRDTGQISWICRRHIHTRSTEITEVPI 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1873 1340 Coils Coil 1090 1117 - -
Sto5g1873 1340 Gene3D - 460 663 IPR027417 -
Sto5g1873 1340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 459 660 IPR027417 -
Sto5g1873 1340 Gene3D Ribonuclease Inhibitor 1 187 IPR032675 -
Sto5g1873 1340 Gene3D Ribonuclease Inhibitor 318 448 IPR032675 -
Sto5g1873 1340 SMART LRR_RI_2 126 153 - -
Sto5g1873 1340 SMART LRR_RI_2 258 285 - -
Sto5g1873 1340 SMART LRR_RI_2 98 125 - -
Sto5g1873 1340 SMART LRR_RI_2 286 313 - -
Sto5g1873 1340 Pfam Ras of Complex, Roc, domain of DAPkinase 462 587 - -
Sto5g1873 1340 SUPERFAMILY RNI-like 70 428 - -
Sto5g1873 1340 Gene3D Ribonuclease Inhibitor 202 317 IPR032675 -
Sto5g1873 1340 PANTHER PROTEIN TORNADO 1 1 1329 - -
Sto5g1873 1340 Pfam C-terminal of Roc, COR, domain 679 891 IPR032171 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1873 - - gmx:100817598 2201.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1873 5 13790377 13795624 Sto5g1873 5 13790377 13795624 ECH