Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1869 ATGGCCACACTGAAGACAATCTCCGCCGCTCTTAAACTCGTCGACACGAAAAAGGAGAGCCTCAGGAAAGCCTACGACGACCTCCACGCCcactcttctcttctctcttccttctcccttTCCTGGTCCGAAATCGATTCGCATTTCACTTCCTTACACAATTCGCTTGCTCAACGTTTCCACGCCCTCGAGTCCCTCGAATCACAACGTAGCCTCCTCCCCAATTCGCACCAagcccttccgtcaatttcttcttCACCCGGTCCCACACGAATCCAGAATTTAAATGAACGGACCGTGGTGCCTAGATACGAGTTGAGTGTTCTGTGCGAGAAGATGGAAGGCAAGGCATTGAGGAAGTATATTGTGGAACACATTAAAGACAAGATTGCTATCCAGGCCGAGCTTCCGGATGCGTTACGGTGTGCTCCGGACCCTGCGGCTATGGTTCTTGACTCGCTTGATGGGTTTTTTGAGGTGAATGAATTGAAGGACGTTGAACTACGTAAGCTTAGGAGGGGTTGCATTACCTTATTGGAACAGTTAAGAGTCATATCTCCAAATATAGGATTCAAAGTGAGAGAACAAGCCAAGAAGTTGGCCGTAGAGTGGAAAGGAAGATTGATGGCTGAAGGTGCGAAGACAATGGAGGCATTGGGTTTTTTGCATTTTGTGGCGGCCTACGGGTTGGTTTCTGAAGCCAGCATGGATGAACTTGTTGATTTTACTGCTATGGCTGCTAACTGCGAGGAGGTTCCCGAGCTGTGCAGAGTTATAGGTTTGGTAGATAAAATTCCCGATCTTGTTCAGAAGCTTGTAGATAAGGGCAAACATGTCATGGCTGTGAAGTATGTTTTTGAGTTTAATCTTAATGACAAGATCCCACCAGTTCCCATCTTGAAAGCTTGTGTGGATGAGGCTAACAAACTAGCTAAAAGACTTAGCCAGGAGGGGAAGCCACTGTCTGAGGTCACAGCTAGAGAAATCCATGCACTGAAAACTGTAATAAAGGTTATTGTGAGTCATAAACTTGAATCTGAATATCCACCAGCAAGCCTTGAACAGCGTATGGAACTACTGAAGAAGCAGATGTCTAATAGAAAACGCCCTGGACCGGCTTCTTTGACAAAGCCtcagcaaaagaaaaagaagcagagGCAGAGGCTGTATTTTCAAACATCTGCCCCTGTAGGTCCTGCAAATGTTGCCAATGCAGCTTCAAACCAGTATCAACAGCCTCTTGTCCAGCCTACAGGTTTGTTACCAGAACAATTGAATCCATACATGAGCTTGCAAGCCATGCCGTATGGCATGGTGGGTCCAACCCCCACCATCTCATCTTATACAGGTCCTTCAGCTGGGCCTTATGGTTATACTGGTGTTCCATTGGGTTCCAGTGGCAACCCCAGTCAAGGTGGTTCACATCTATACACCTCAGAGCCTCATTCGCAGCCTGGTTATTATGACAGAACCACTGCTTCTAATGGTTATGGTCTTCAACACTATTACGCGTCCTACTATCCTCAATAG 1530 0.4464 MATLKTISAALKLVDTKKESLRKAYDDLHAHSSLLSSFSLSWSEIDSHFTSLHNSLAQRFHALESLESQRSLLPNSHQALPSISSSPGPTRIQNLNERTVVPRYELSVLCEKMEGKALRKYIVEHIKDKIAIQAELPDALRCAPDPAAMVLDSLDGFFEVNELKDVELRKLRRGCITLLEQLRVISPNIGFKVREQAKKLAVEWKGRLMAEGAKTMEALGFLHFVAAYGLVSEASMDELVDFTAMAANCEEVPELCRVIGLVDKIPDLVQKLVDKGKHVMAVKYVFEFNLNDKIPPVPILKACVDEANKLAKRLSQEGKPLSEVTAREIHALKTVIKVIVSHKLESEYPPASLEQRMELLKKQMSNRKRPGPASLTKPQQKKKKQRQRLYFQTSAPVGPANVANAASNQYQQPLVQPTGLLPEQLNPYMSLQAMPYGMVGPTPTISSYTGPSAGPYGYTGVPLGSSGNPSQGGSHLYTSEPHSQPGYYDRTTASNGYGLQHYYASYYPQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1869 509 Pfam Frigida-like protein 101 369 IPR012474 -
Sto5g1869 509 MobiDBLite consensus disorder prediction 463 491 - -
Sto5g1869 509 MobiDBLite consensus disorder prediction 364 388 - -
Sto5g1869 509 MobiDBLite consensus disorder prediction 460 491 - -
Sto5g1869 509 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 1 505 - -
Sto5g1869 509 PANTHER FRIGIDA-LIKE PROTEIN 1 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1869 Sto-Chr5 13770384 13772656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1869 - - aprc:113856203 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1869 5 13770384 13772656 Sto5g1869 5 13770384 13772656 ECH