Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1840 ATGGCGCCTGCGAGAACAGCAGGCGCTGCTGTAGTTGCTACCGTCTTTGTCTCACTCGCTCTCTCCTACTTCATCTGCGATCGTCGCACCAAGTCTCCCTCCAACAATACTCAATCACCTTCGTCGAACAAGAAATCGtcgaacaagaagaagaagggactTGTTGATGCCATTGGTAACACGCCTTTGATTCGTATCAACAGCCTCTCCGACGCCACTGGTTGCGAAATTCTCGGAAAGTGCGAGTTTCTGAATCCAGGAGGGAGCGTGAAGGATCGAGTTGCGGTGAAAATCATTGAAGAGGCTTTATCATCAGGCCAACTATGTCCTGGTGGAATAGTTACTGAAGGGAGTGCTGGAAGCACTGCCATTAGCCTTGCCACTGTTGCTCCTGCCTACGGATGCAAATGCCATGTGGTTATTCCAGATGATGCTGCCATCGAAAAGTCTCAGATAATTGAAGCCCTAGGAGCAACTGTTGAAAGAGTTCGGCCAGTGTCAATTACTCACAAAGACCATTTTGTCAATATTGCAAAAAGACGGGCATCAGAAGCAAATGAATTTGCATCAAAGCATAGAAGAAAATCACATTTGACTGGCGGGAACATAGAACCAGTTAATGGTTACCGATCTGATGGAGAAAGTCAAAACTCAGTTTTTCCCATAGATTGTCAAGGTGGCTTCTTTGCTGATCAGTTTGAAAATTTGGCTAACTTCAGGGCCCACTATGAGGGTACAGGACCTGAGATTTGGGAACAGACAAATGGAAATTTGGATGCATTTGTTGCTGCCGCAGGCACTGGTGGCACTCTGGCTGGTGTTTCTAGTTTTCTTCAGGAGAAGAATCCAAACATCAAGTGCTTCCTTGTAGATCCTCCTGGTTCTGGTTTGTTCAACAAGGTAACAAGGGGAGTAATGTACACCAAACAGGAAGCAGAAGGAAGAAGACTCAAGAATCCATTTGACACAATAACAGAAGGAATTGGAATTAACAGGATAACAAAGAACTTTATGATGGCCAAACTTGATGGGGCTTTTCAAGGCTCAGATATGGAGGCTGTTGAAATGGCTAGATTTCTTTTGAAGAATGATGGGCTCTTTCTTGGGAGTTCATCAGCAATGAACTGTGTTGGAGCAGTTAGATTGGCACAGGCAATTGGACCTGGTCACACAATAGTAACCATTCTCTGTGACAGTGGAATGAGACATCTGAGCAAGTTCTACAATCCCCAATACTTGTCTCAGCTTGGCTTGACCCCTAAAGCACATGGATTGGAGTTTTTGGGATAA 1290 0.4426 MAPARTAGAAVVATVFVSLALSYFICDRRTKSPSNNTQSPSSNKKSSNKKKKGLVDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVKIIEEALSSGQLCPGGIVTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIAKRRASEANEFASKHRRKSHLTGGNIEPVNGYRSDGESQNSVFPIDCQGGFFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTLAGVSSFLQEKNPNIKCFLVDPPGSGLFNKVTRGVMYTKQEAEGRRLKNPFDTITEGIGINRITKNFMMAKLDGAFQGSDMEAVEMARFLLKNDGLFLGSSSAMNCVGAVRLAQAIGPGHTIVTILCDSGMRHLSKFYNPQYLSQLGLTPKAHGLEFLG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1840 429 MobiDBLite consensus disorder prediction 31 51 - -
Sto5g1840 429 Gene3D - 225 239 IPR036052 -
Sto5g1840 429 Gene3D - 88 186 IPR036052 -
Sto5g1840 429 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 80 98 IPR001216 GO:0006535
Sto5g1840 429 Pfam Pyridoxal-phosphate dependent enzyme 56 398 IPR001926 -
Sto5g1840 429 MobiDBLite consensus disorder prediction 186 209 - -
Sto5g1840 429 CDD CBS_like 59 405 - -
Sto5g1840 429 Gene3D - 58 87 IPR036052 -
Sto5g1840 429 Gene3D - 240 404 IPR036052 -
Sto5g1840 429 PANTHER CYSTATHIONINE BETA-SYNTHASE 22 428 - -
Sto5g1840 429 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 51 410 IPR036052 -
Sto5g1840 429 PANTHER CYSTEINE SYNTHASE-RELATED 22 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1840 Sto-Chr5 13481570 13485834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1840 58 405 Miscellaneous Gene Families AT3G04940 30.571 6.66e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1840 K01738 - gmx:100799081 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1840 5 13481570 13485834 Sto5g1840 5 13481570 13485834 ECH