Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1838 ATGCAGCTCCGGCCGATGACCTCAGCCGCCGGAACTCTCCTCCTCGCGGTGTTGCTGCTCTGCTCCGGCAGTCTCACCTCCGCGCACAACATCACGCGCATTCTGGCCAAGCATCCAGAGTACTCCACCTTCAACCACTACCTATCCATCACACACCTTGCATCGGAAGTCGACCGCCGCACCACAATCACCGTCTGCGCCGTCGACAATGCCGCCATGAACGAGCTCCTCTCCAAGCATCTCTCCATCTACACTATCAAGAACATTCTCTCGCTCCACGTCCTTCTTGACTACTTCGGCGCCAAGAAGCTCCACCAGATCACCAACGGCACGGCCTTGGCCGCCACCATGTTCCAGTCCACCGGAACTGCTCCCGGATCCTCCGGATTCGTCAACATTACGGATCTCCGAGGCGGCAAGGTCGGATTCGGCGCGGAAAACAACGACGGAACTCTCTCGGCTTATTTCGTCAAATCCGTTGAAGAGATTCCGTACAATATCTCTGTGATTCAGATCAGTAAGGTTTTACCGTCGGATGTAGCGGAAGCGCCGACGCCGGCGCCGAGCCAACAGAATATCACGGCGATTATGTCGAAGCATGGATGCAAGGTTTTCGCCGAGACGCTTCTGGCGTCGGATGCTGAAAAGACCTATATGGACACTCTCGACGGCGGATTGACGGTGTTTTGCCCTATGGACGACGCCTTCAAGGCATTTCTGCCGAAGTACAAGAACTTGACGGCGGCCGGAAAGACGGCGTTGCTGGAATATCACGGCGTTCCGGTGTACCAGTCTCTTGCTATGTTGAAGTCAAACAATGGCTTGTTGAACACACTGGCCACTGATGGAGCTAACAAATTTGACTTCACAGTGCAGAACGAAGGCGAGGAAGTGACGCTAAGGACCAAAATCACGACGGCGAAAATCACCGGAACTCTCATCGATGAGCAGCCTCTAGCGATCTACACCATTGACAAGGTCCTGATGCCGAGGGAGCTGTTCAAGAAGGCGGAGGCACCAACTCCGGCTCCGGCGCCAGCGCCTGAACCTGCGGCGGCGGACGCGCCGGAGGcaccgaagaagaagaagaagaaggcagcTGCACCTGCGGATGCTGATTCGGACGCACCTGCTGATTCACCGGACGATGCTGCGGATGTGACGGCGGACGATAACGGCGCTGTTAGATTTGACGGTGCTAGGTACATTTCCGTTGTGGCGGCTTCGGTATTCGGGTTCCTACTGCTGTAA 1251 0.55 MQLRPMTSAAGTLLLAVLLLCSGSLTSAHNITRILAKHPEYSTFNHYLSITHLASEVDRRTTITVCAVDNAAMNELLSKHLSIYTIKNILSLHVLLDYFGAKKLHQITNGTALAATMFQSTGTAPGSSGFVNITDLRGGKVGFGAENNDGTLSAYFVKSVEEIPYNISVIQISKVLPSDVAEAPTPAPSQQNITAIMSKHGCKVFAETLLASDAEKTYMDTLDGGLTVFCPMDDAFKAFLPKYKNLTAAGKTALLEYHGVPVYQSLAMLKSNNGLLNTLATDGANKFDFTVQNEGEEVTLRTKITTAKITGTLIDEQPLAIYTIDKVLMPRELFKKAEAPTPAPAPAPEPAAADAPEAPKKKKKKAAAPADADSDAPADSPDDAADVTADDNGAVRFDGARYISVVAASVFGFLLL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1838 416 Gene3D FAS1 domain 173 331 IPR036378 -
Sto5g1838 416 SUPERFAMILY FAS1 domain 185 331 IPR036378 -
Sto5g1838 416 SMART fasc_3 227 331 IPR000782 -
Sto5g1838 416 SMART fasc_3 64 179 IPR000782 -
Sto5g1838 416 ProSiteProfiles FAS1/BIgH3 domain profile. 28 176 IPR000782 -
Sto5g1838 416 MobiDBLite consensus disorder prediction 355 370 - -
Sto5g1838 416 ProSiteProfiles FAS1/BIgH3 domain profile. 189 328 IPR000782 -
Sto5g1838 416 SUPERFAMILY FAS1 domain 34 176 IPR036378 -
Sto5g1838 416 Pfam Fasciclin domain 206 330 IPR000782 -
Sto5g1838 416 Pfam Fasciclin domain 40 115 IPR000782 -
Sto5g1838 416 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 8 404 - -
Sto5g1838 416 MobiDBLite consensus disorder prediction 338 391 - -
Sto5g1838 416 Gene3D FAS1 domain 27 172 IPR036378 -
Sto5g1838 416 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 404 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1838 Sto-Chr5 13451540 13452790 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1838 - - lang:109350304 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1838 5 13451540 13452790 Sto5g1838 5 13451540 13452790 ECH