Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1836 ATGTCAGATTCAGCAAGTGCATCTGAAACAATAGGAGACAGAGGGGAGTTGCATGAAAATGGTTTTGAATGTGTTGGAAATGATGAAATTCTGGAAGCCACCAATGATGCTCATGGAGGAGTCATTGTAGAGATGAAGAAGCCAATGGAACCTCAAGTTTTTCTTACTTTGCTCAGAGCTTCACTTCTACAATGGAAGAAACagAGGAAAGAGGGTGTCTGGATCAAGTTACCTATTGAGCTTGTTAATCTGGCTGAAACAGCAGTTAAGGAGGGGTTCTGGTTCCACCATGCTGAGCCAAGCTATGTGATGCTAGTTTACTGGATTCCCCAAACTGGGAGCACTATCCCTCCCAACGCTTCCCATCGTGTATCAGTTGGTGCTATTGTCTTGAATGATAAGAAAGAGGTGCTGGTAGTACAAGAAAAGAGAGGTATATTCCATGGTCTAGGGGTGTGGAAAATTCCTACTGGAGTAGTAGATGCAGGTGAGGATCTTTTTGCAGCAGCTATCAGAGAAGTAAAAGAAGAGACAGGAGTAGGTGTTTTACCTATGCTGCTATATTTCTCCAATGCTTGGATGGCATTTGAGGAATATGCTGCTCAACCTTTTACCCAGAAGCATGAGCCCTTCAAATACATTAATGAATTCTGTTTGGCAAAGCTACAAAAGAACTACTATGCTGGATTCTCTGCAAGACCCCTTTCTTCATTCTTCAAGGACCACTTGGGTTTTCTATATTTGAATAGCCATGACTTGGACAACCACTTCCTTTAA 777 0.4221 MSDSASASETIGDRGELHENGFECVGNDEILEATNDAHGGVIVEMKKPMEPQVFLTLLRASLLQWKKQRKEGVWIKLPIELVNLAETAVKEGFWFHHAEPSYVMLVYWIPQTGSTIPPNASHRVSVGAIVLNDKKEVLVVQEKRGIFHGLGVWKIPTGVVDAGEDLFAAAIREVKEETGVGVLPMLLYFSNAWMAFEEYAAQPFTQKHEPFKYINEFCLAKLQKNYYAGFSARPLSSFFKDHLGFLYLNSHDLDNHFL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1836 258 ProSitePatterns Nudix box signature. 158 179 IPR020084 GO:0016787
Sto5g1836 258 SUPERFAMILY Nudix 89 189 IPR015797 -
Sto5g1836 258 Gene3D - 28 114 - -
Sto5g1836 258 ProSiteProfiles Nudix hydrolase domain profile. 121 258 IPR000086 -
Sto5g1836 258 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 117 233 - -
Sto5g1836 258 Pfam Nudix hydrolase domain 31 109 IPR040618 -
Sto5g1836 258 PANTHER NUDIX HYDROLASE RELATED 26 180 IPR003293 -
Sto5g1836 258 PANTHER NUDIX HYDROLASE RELATED 192 255 IPR003293 -
Sto5g1836 258 Pfam NUDIX domain 122 190 IPR000086 -
Sto5g1836 258 PANTHER NUDIX HYDROLASE 2 192 255 - -
Sto5g1836 258 PANTHER NUDIX HYDROLASE 2 26 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1836 Sto-Chr5 13437797 13443013 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1836 - - gmx:100783941 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1836 5 13437797 13443013 Sto5g1836 5 13437797 13443013 ECH