Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1821 ATGAGCGGCGGTGGCGGGTCTAGGGTTCCGATCCCCAACAATGTACGGAGAACCATCCAAGACATTAGGGAGATCACCGGCAAACAGCACGCCGACGATGAAATCTACGCCGTTCTCAAGGAATGCTCTATGGATCCCAATGAGACCGCTCAAAAGCTTTTGTATTTAGaTACTTTCCATGAGGTGAGAAGGAGACGTGACAGGAAGAAGGAGGGCTTGGCCAGTAGGGTTCCCGAGGATTCTAGGTCGAAGCAAGCTGGacaagggagaagaggaaggggcGCTTCTGGGGGCAATGCCTATTCCTCTAATTTTCCTGATGGAGCTGGTGGGAGGAATCCTGCTATTCGTAGGGAAAATGGAGTCAATCACATTGTAGAGAGAGGTCAAGCACCCTCTACTCGGCCAGTTTTGcagaaaacaaaaaatcttGAAGCATCTCAAGTCATAAGAGTGTCAACTGTTGCTTCTAATGGTCCTGCAAATCAATCCAATGGGAGTTTTGGTGGTTCTGTTGATCAAAGTCACACAGACAGTGTTACAAGTGTCtctaataaaattatagttaatAATGACAATAGCAAACAAGAAAATGATCTGCCTCAAGCTGCTGTTGTTGCTGCATCGTCCCCTACTCAGACCTTTACCAAAGTTGTCCAAGGAAAGTCTGTATCGAGTTCTGATCTGTTTGCAACCAGTTCTTCAGCATCTGATGCTGTTGTTTTTTCATCCTCTGTGGTTCCCGCTGTGCAACAATCTATGCCTCTGAATCTTTGTTTTGGCAATACAAGTGATATTAATGAGGAAGTTGGGAGCCAGTGGATTGCTTCTGGAGTAAATCCTGTCAAAGGGGACAAAGTTGTTCTCTCTGAAGTTGGTGATTCACTAACATCCAAGAGCCAAAAATCTGAGTCTTTGAATACAAGCAAAACGATTACCCCAAATAAATCAAGTGAAATTAAAAAGAACCAGCTCTCTGAGACCTCGCAACCCTCCTCTTCAACTTATAATGGTTCATTGATGTCATCTTCGAGTTGTTCTAGCCAGCCACCTTCAGTCAATGTCTCAGACGTTTCAAGTTCTGAAGTTTGTGTGCCATCGTCTGCTGGGTTGAAGCAATTTGTTACTTTTCCAAATCATTTTCAAGTACCTGAGGCTTTTAAAAATGGTCTGACATTTGGAAGCTTTGATTCTAATTCTGGTCAGAAAGAAAGATCTATCAGTGGAACGGGTGGTGACAATAAAGCTTTGCTCACCCTTGAATCTTCTATAGGGAGTGATGACACTACTACTTCTAGCAACCAAAGTGTATCAACTGCACATAGAGATCATCCTGATTATTCACAGACTCTGTCTTATCAGATCGAAAAGAAACCATCTCCAGAAGGAAATGCTGTCTCTGGTGCCAACTCAATAGGTGATCAGCCAAAGCAAGAGGTATTGTTGACTTCAGAGGGTCCTCCAAGTCCTACAGTTCAAAATGGTCAGAACTATTTAAATTTCATGCCCACCATGTTAGGAAATCAACAATTTCAGTTGGAGGGAGCTGAGCCACAAGTCCAAGAAACATCTCGCCTTCCAAACTTTGGTGCAGATTCTCAGGCTGCATCTAGCTCTGGTCCAACTCCACCTCTTCAGAACTCTATACCTGTGCCACCACAATCAGTTTCTATTTTTAGGCCACCTTACCCTACTAACTTCTTCCCTTATGGCCACTATTACCCTCCAATTTATTTGTCTCCAATGCACCAATTTTTGAACCACAATGGCTTCCCTCAACAGCCATCAGCTGGCAATTTGTATCTACCTGCAGCACCTGGGATCAAATTCCCTCTCTCCCAATTCAAGGCTGGAGCAAATACAGGAAACATGGCCGCCCATATTGGAATTCCTTCTGGATCATTTATCTCCCCTCCTGTTGGATATGCTCCTAGTCCAACAGTGAATTCAGTAAGCTCTTCCGGAAATGAAGATCTTGCAGTGTCTCAATTAAAGGAAAATCATATCTATTCAAGTGGACAGCTGAGTGAAGGTTCAGCCGTGTGGATACCTTCACCAGGCCAAGATATATCCAGTATGCAATTGAATTCTTTGTATAACCTTACCCCACAGGGACAACATCATCTCGCCTTCTCCCAAACACAGGCAGGTCGTGGTGCTTTTGCTGGTATCTATCAACCAGGGCAGACTGTAGCTTCTCATTCGACTCTGTTGCAACAGTCTCAGGCTGTGGCTTCTGTTGAAACTGCAGGAACCCCTTctggcgcttttcagctgccacAGAATGCACAGATCAATTGGAATTCTAATTTTTAG 2316 0.4279 MSGGGGSRVPIPNNVRRTIQDIREITGKQHADDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGLASRVPEDSRSKQAGQGRRGRGASGGNAYSSNFPDGAGGRNPAIRRENGVNHIVERGQAPSTRPVLQKTKNLEASQVIRVSTVASNGPANQSNGSFGGSVDQSHTDSVTSVSNKIIVNNDNSKQENDLPQAAVVAASSPTQTFTKVVQGKSVSSSDLFATSSSASDAVVFSSSVVPAVQQSMPLNLCFGNTSDINEEVGSQWIASGVNPVKGDKVVLSEVGDSLTSKSQKSESLNTSKTITPNKSSEIKKNQLSETSQPSSSTYNGSLMSSSSCSSQPPSVNVSDVSSSEVCVPSSAGLKQFVTFPNHFQVPEAFKNGLTFGSFDSNSGQKERSISGTGGDNKALLTLESSIGSDDTTTSSNQSVSTAHRDHPDYSQTLSYQIEKKPSPEGNAVSGANSIGDQPKQEVLLTSEGPPSPTVQNGQNYLNFMPTMLGNQQFQLEGAEPQVQETSRLPNFGADSQAASSSGPTPPLQNSIPVPPQSVSIFRPPYPTNFFPYGHYYPPIYLSPMHQFLNHNGFPQQPSAGNLYLPAAPGIKFPLSQFKAGANTGNMAAHIGIPSGSFISPPVGYAPSPTVNSVSSSGNEDLAVSQLKENHIYSSGQLSEGSAVWIPSPGQDISSMQLNSLYNLTPQGQHHLAFSQTQAGRGAFAGIYQPGQTVASHSTLLQQSQAVASVETAGTPSGAFQLPQNAQINWNSNF 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1821 771 MobiDBLite consensus disorder prediction 529 549 - -
Sto5g1821 771 Pfam GBF-interacting protein 1 N-terminal 11 71 IPR009719 -
Sto5g1821 771 SUPERFAMILY UBA-like 11 72 IPR009060 GO:0005515
Sto5g1821 771 MobiDBLite consensus disorder prediction 423 446 - -
Sto5g1821 771 PANTHER FLOCCULATION PROTEIN (DUF1296) 3 771 IPR044277 -
Sto5g1821 771 MobiDBLite consensus disorder prediction 64 87 - -
Sto5g1821 771 MobiDBLite consensus disorder prediction 298 358 - -
Sto5g1821 771 PANTHER GBF-INTERACTING PROTEIN 1-LIKE 3 771 - -
Sto5g1821 771 MobiDBLite consensus disorder prediction 157 179 - -
Sto5g1821 771 MobiDBLite consensus disorder prediction 64 116 - -
Sto5g1821 771 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1821 Sto-Chr5 13310687 13320310 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1821 - - gmx:100819602 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1821 5 13310687 13320310 Sto5g1821 5 13310687 13320310 ECH