Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1761 ATGGCTTCATGGtgctcctcttcttcttcttcctgcgCCGCCATCACTTGCGGCTACTCTCTCAACTCCCACACTTCCACATTGCACCATCGCCCTGTGCTTCGACTCAATCCCTTACCACCTTCTTCGTCTTCTCGCTGCACCCCCATCGCATCTTCGATTCGAATTACAGTTCCATTCCACGATAAAAAGGCAATTCGAAACAGGAATTTGAACTGTTTTGGAAGAGTGATTGTAAAATGCACTACTAGTGGTACGGAAATCGAGAGGGAGGAGGGTTTGTCGTCTTCGCCGTCGGAAATGGATTGCGTGGGGACAGGACAAGACGTGGAGTGCCTCCTCGCGCCGCAGGAAGAGAAAGAGGTGTCGGCGACGGCGGTGGCGGTGGCGGAAGAGGAATCGTTGGGAATTACTTTAGAGGGTTTGTGGGAGTGGGCGGTGTTGGTGTCGCCGTTCTTCTTTTGGGGAACGGCTATGGTGGCCATGAAGGAGGTGATTCCCAAATCTGGACCGTTCTTTGTATCTACGTTTCGTCTAATTCCCGCTGGATTGCTCCTTGTTGCTTTCGCTGCTTCCCGAGGTCGACCTTTTCCTTCTGGGTTCAACGCCTGGCTTTCAATTTCTCTGTTTGCTCTCGTCGATGCTGCTTGTTTTCAGGGTTTTCTTGCTGAAGGGTTACAGAGGACATCAGCTGGTTTGGGCAGCGTCATAATTGATTCACAACCTTTGACTGTGGCTGTTCTTGCAGCCTTGTTATTTGGTGAGTCCATTGGAATCGTTGGAGCTGCAGGGCTTGTTTTTGGTGTCATaggacttgtacttcttgagTTACCTGCTCTATCATTCGATGAGAGTAATTTTTCACTGTGGGGGAGTGGGGAGTGGTGGATGCTTCTTGCAGCTCAAAGCATGGCAGTTGGCACAGTCATGGTTCGCTGGGTTTCTAAGTACTCTGATCCTGTAATGGCAACTGGATGGCACATGGTTATTGGTGGTCTCCCTCTTTTGGTAATTTCCGTTCTCAACAATGATCCTGCAATTAGTGGGAGTCTTAAAGAATTCAATTCAACTGATATATTGGCACTCCTCTACACATCTATTTTTGGAAGTGCAGTCAGCTATGGTGTATTCTTCTATAGTGCAACTAAAGGTAGCTTGACTAAGCTTAGCTCCCTCACATTTTTAACCCCAATGTTTGCTTCCATTTTTGGGTTTCTATATCTTGGAGAGACCTTCTCACCTTTACAACTTGTTGGAGCCGTTGTTACGATAGCTGCAATATACATGGTGAAACTTaaaaatgatataaataagTAA 1317 0.4541 MASWCSSSSSSCAAITCGYSLNSHTSTLHHRPVLRLNPLPPSSSSRCTPIASSIRITVPFHDKKAIRNRNLNCFGRVIVKCTTSGTEIEREEGLSSSPSEMDCVGTGQDVECLLAPQEEKEVSATAVAVAEEESLGITLEGLWEWAVLVSPFFFWGTAMVAMKEVIPKSGPFFVSTFRLIPAGLLLVAFAASRGRPFPSGFNAWLSISLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGIVGAAGLVFGVIGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLLVISVLNNDPAISGSLKEFNSTDILALLYTSIFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAVVTIAAIYMVKLKNDINK 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1761 438 SUPERFAMILY Multidrug resistance efflux transporter EmrE 326 434 - -
Sto5g1761 438 Pfam EamA-like transporter family 292 430 IPR000620 GO:0016020|GO:0016021
Sto5g1761 438 Pfam EamA-like transporter family 145 275 IPR000620 GO:0016020|GO:0016021
Sto5g1761 438 PANTHER INNER MEMBRANE TRANSPORTER 140 435 - -
Sto5g1761 438 SUPERFAMILY Multidrug resistance efflux transporter EmrE 177 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1761 Sto-Chr5 12741025 12746234 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1761 - - gmx:100783291 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1761 5 12741025 12746234 Sto5g1761 5 12741025 12746234 ECH