Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1759 ATGGTGTGGGGCCTCTTTCCCGTCGATCCTCTTTCAGGTGAAGATAAGTACTACATCTTTAGATGTGGAACTTACAGAGTTGGCCGAAAAGGTTGTGATGTAATCATCACTAAAGATAAAGGGGTTTCTCGGGTTCATGCAGAAATAGTCGTGAATGAAATGACCACATTAAATCCTCATCCAAATGAACCCTTTTACATGTCCCCCAATATAAAGGTTAGAGATTTATCTAAGTATGGGACATTTATTAGCAAGAATGTTGAGCCCCGGAGAAAAGTTCATGAGCTTCCGAACAAAGAAACAACACTAGAGGATGGTGACCTTATTTCTTTTGGTACTGGTAGTGCCACCTACAGGTTTTGCCATGTCCGGCTAGTTTTCTTCATATGTTCGACAGATAAATCAAGACTGGTCTTAGAGCTTTGCCCAACTTACACTTTCTTATTAGGTGGTCGCATTACTAACACATTAAGTCAAGAGTGCACACATGTGCTGGTGGATGAAAACATGCCTTTGAAGACTGATCTTGTTGATGCTGTTGTGGCTAAAAAACCTTGTGTTCTCAAAACTTGGGTTGAGTTTATTGCAGAAAAGAATGTTGGCACTGAAATTCCTAGCTGTAATTCCTACATTCCAACACTATCAGTGGAAGGAGCATCAGTCAGCGTTGCTGACCCTAAAGCCCGTGAGCACTGCTTAAAAGGATATACCTTTTTGTTGGAATCAGAGCACTTgTACAAATTCAGGGCCAAGTTGAAATCTTTACTGGAAGTTGGTGGTGCAAAAATTGTTGCTTTTGAAGAATTTTGTACCAATAGCCAAGGCTCAGACTATGGAGATAATAATCGTGTGGTTTGCGTAATGCCTGGAGGACCAGCATGCAAGTCTGATCGCTTCCATAAACTAAGTTCTTTATCCAGAGTGAATGAGATGGATGTGATATGTGCTGCTTTAAGTGGACAGCTAGATCTGTCTACATTGATATCACCATGTgAATGCATTGCTTTAATCAATAGCACAACAGTAGTAGCAGATTCTGATACTGAAGTTGAAGTTGAAACAGCCACATCAGCCCATGCAAGTGTGACGTTGTGCACAGGAAAtaatataaagtataaaaaagaagaaatgccAGCGGATGATACTCCTGTCATATTTGATGATAAGAAACATGAGAGAATGAGGACATCCTCGGAAGTTGCTTCTGCTAGATTAGATGACATAAAATGTGCAAAAACGGAAACATCCTTGGATGGTGCTTCTTCCAGATTGGATGATCATGCTACCAGCTTCAGGGAAAGTAGTGGTCATATGACAGTGAAGAAAGACAAGGTTGATGATTCTGAAAGTAGAGACTCAGATATAGTTTACAGCGTGGATTTAATTGTCCGAGATGTAAATGCTGCACCAAACAGCAGCTCTGGGAATATCGAAGTGCAGAGACTTTgcagaaatgaaaatggaaatagaaacgaaaatggaaacggaatgcatttgatTGTAATTTGCTCAAAATTTACATATGATAAGATGGATAAACTATATTGgaatgcactgaaattcagtgTTTTCCTTAAACGTGACATGCAGGCACTTCAAATTATTTCAAGGGTGTttagaaccgaacaaaaccTGACTAAATCGGACAACACAACTTTGAACAGCAAAGAATCTGCGCACGTATGA 1686 0.3743 MVWGLFPVDPLSGEDKYYIFRCGTYRVGRKGCDVIITKDKGVSRVHAEIVVNEMTTLNPHPNEPFYMSPNIKVRDLSKYGTFISKNVEPRRKVHELPNKETTLEDGDLISFGTGSATYRFCHVRLVFFICSTDKSRLVLELCPTYTFLLGGRITNTLSQECTHVLVDENMPLKTDLVDAVVAKKPCVLKTWVEFIAEKNVGTEIPSCNSYIPTLSVEGASVSVADPKAREHCLKGYTFLLESEHLYKFRAKLKSLLEVGGAKIVAFEEFCTNSQGSDYGDNNRVVCVMPGGPACKSDRFHKLSSLSRVNEMDVICAALSGQLDLSTLISPCECIALINSTTVVADSDTEVEVETATSAHASVTLCTGNNIKYKKEEMPADDTPVIFDDKKHERMRTSSEVASARLDDIKCAKTETSLDGASSRLDDHATSFRESSGHMTVKKDKVDDSESRDSDIVYSVDLIVRDVNAAPNSSSGNIEVQRLCRNENGNRNENGNGMHLIVICSKFTYDKMDKLYWNALKFSVFLKRDMQALQIISRVFRTEQNLTKSDNTTLNSKESAHV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1759 561 PANTHER NIBRIN-RELATED 2 474 IPR040227 GO:0006302|GO:0007095|GO:0030870
Sto5g1759 561 Pfam FHA domain 25 112 IPR000253 GO:0005515
Sto5g1759 561 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 88 IPR000253 GO:0005515
Sto5g1759 561 CDD BRCT 148 193 - -
Sto5g1759 561 SUPERFAMILY BRCT domain 134 199 IPR036420 -
Sto5g1759 561 ProSiteProfiles BRCT domain profile. 149 192 IPR001357 -
Sto5g1759 561 Gene3D - 4 123 - -
Sto5g1759 561 CDD FHA 2 120 IPR000253 GO:0005515
Sto5g1759 561 SUPERFAMILY SMAD/FHA domain 16 121 IPR008984 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1759 K10867 - gmx:100783205 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1759 5 12716720 12730830 Sto5g1759 5 12716720 12730830 ECH