Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1754 ATGGATCAGCTCAAACCAAATCCTGCAAATTCCACTCCTCTCACTCCCTTGACCTTATTGGAAAGAGCTGCCATTATTTACAATGACTCTCCTTCCATTGTCTATAATGGCTCTATTCACAGTACTTGGTCCCAAACCCACCGGCGTTGCCTCCGGCTGGCTTCGTCGATCTCCTCCCTCGGCATCCGCCGCCGCCACGTCGTCTCCGCCCTCGCCCCCAACATCCCCGCCATGTACGAGCTCCACTTCGCCGTCCCCTTCGCCGGCGCCGTCCTCAGCAACCTCAACATCCGCCTCGACCCCCGCACCGTCGCCGCCCTCCTCCGCCACAGCGACTCCAGACTCGTCTTCGTCGACCAACAACACAAATCCCTCCTCCTCGACGCATTGTCCTTCTTCCCTCCCGACCTCGCTCCCCCTCTTGTCGTCCTCATCTCCGACGACGATGACGGAATCGACATTGTTGATAGTAGTAGTACTGTGTTTGTTGACACCTACGAGGGTTTGATCCGAAGAGGCGATCCCGGGTTCGAGTGGGTCCGGCCCGAGTCAGAGTGGGACCCGATTGTTTTGAACTACACATCCGGAACGACGTCGTCTCCGAAAGGGGTTGTTCATTCCCATAGAGGCGCCTTCGTCGTGACTCTTGATTCTCTCGTGGACTGGTCGGTGCCGAAGCAGCCGGTGTACCTCTGGACGTTACCGATGTTCCACTCCAACGGGTGGAGCTTCCCGTGGGGGATGGCCGCCGTCGGCGGGATCAACATTTGCCTGAGTAGATTCGACGCGCCGACGATCTACCGTCTGATTGCGACCCACGGCGTGACTCACATGTGCGCCGCGCCGGTGGTTCTCAACATGCTATCCAACTCCAAGAGCAAAACCGAACCGATGAGAAACCCGGTTCACCTGCTCACCGGCGGGTCCCCCCCGCCGGCGGCGGTTCTCTCCCGGGCGGAATCTCTCGGGTTCCTGGTGAGCCACGGGTACGGGCTAACCGAAGCCCTCGGAGTCATCATCTCGTGCGCGTGGAAACCGCGGTGGAACCGTTTCCCGGCGACGGAGAGAGCGAGGCTGAAGGCGAGGCAGGGAGTGCGGACGCTGTCCGCGACGGAGGCAGACGTGGTGGATCTCGAATCGGGTCGGAGCGTGAGACCCGACGGGTCGCAAATTGGGGAAATCGTCCTGAGAGGCGCGTGCGTGATGATGGGGTACCTGAAGGACCCGGGAGCCACGTCGGAGTCGATTAACCCGAACGGGTGGTTCTACACGGGAGATCTGGGCGTGATGCACGAGGATGGGTACATAGAGATCAAGGATCGAAGGAAGGATGTGATAATCAGCGGGGGAGAGAATGTGAGTAGTGTGGAGGTGGAGGCGGTGTTGTACACGCACGAGGCGGTGAACGAGGCGGCGGTGGTGGCTCGGCCGGACGAGTTCTGGGGGGAGACGGCGTGTGCGTTCGTGAGCTTGAAGAAAAATGGGGCGGAGAAGAAGCCGACGGAGAAGGAGATAATGGAGTACTGTAGAGAGAAGATGGCGAAATTCATGGTTCCCAAAACGGTTGTGTTTAGGGAAGAGCTTCCGAAGACGGAAACGGGGAAGATTGTGAAGCATTTGCTTAGGAAGGAGGCTCAGGCTATGGGTTCGTTAACGGTAACGGTAACGGTTGCAGGTAGTAGGATGTAG 1689 0.5891 MDQLKPNPANSTPLTPLTLLERAAIIYNDSPSIVYNGSIHSTWSQTHRRCLRLASSISSLGIRRRHVVSALAPNIPAMYELHFAVPFAGAVLSNLNIRLDPRTVAALLRHSDSRLVFVDQQHKSLLLDALSFFPPDLAPPLVVLISDDDDGIDIVDSSSTVFVDTYEGLIRRGDPGFEWVRPESEWDPIVLNYTSGTTSSPKGVVHSHRGAFVVTLDSLVDWSVPKQPVYLWTLPMFHSNGWSFPWGMAAVGGINICLSRFDAPTIYRLIATHGVTHMCAAPVVLNMLSNSKSKTEPMRNPVHLLTGGSPPPAAVLSRAESLGFLVSHGYGLTEALGVIISCAWKPRWNRFPATERARLKARQGVRTLSATEADVVDLESGRSVRPDGSQIGEIVLRGACVMMGYLKDPGATSESINPNGWFYTGDLGVMHEDGYIEIKDRRKDVIISGGENVSSVEVEAVLYTHEAVNEAAVVARPDEFWGETACAFVSLKKNGAEKKPTEKEIMEYCREKMAKFMVPKTVVFREELPKTETGKIVKHLLRKEAQAMGSLTVTVTVAGSRM 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1754 562 Pfam AMP-binding enzyme C-terminal domain 457 535 IPR025110 -
Sto5g1754 562 CDD ttLC_FACS_AEE21_like 12 543 - -
Sto5g1754 562 Gene3D - 3 443 IPR042099 -
Sto5g1754 562 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 551 - -
Sto5g1754 562 SUPERFAMILY Acetyl-CoA synthetase-like 10 546 - -
Sto5g1754 562 Pfam AMP-binding enzyme 26 448 IPR000873 -
Sto5g1754 562 Gene3D - 444 548 IPR045851 -
Sto5g1754 562 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Sto5g1754 562 PANTHER ACYL-ACTIVATING ENZYME 2 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1754 Sto-Chr5 12682342 12684030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1754 1 548 EF-hand Containing Proteins AT1G21540 57.895 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1754 - - pvy:116135437 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1754 5 12682342 12684030 Sto5g1754 5 12682342 12684030 ECH