Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1685 ATGTCTCTACGGCTAGTAGCAGCAAATTTAATCAAAAGATTCCGTTTTCCTGCTCGTGATGCCCGTTCAGCTTCTGTAAGAAATTCCAAAGCGTCACCCATCTCACTTTCTGGCGAAGTTTATACATCCCATTGGCATGGAAGTGGAGCATATGGTTGGAGGATAGATCCTAGGGATCCTCGTCTATGGATTGTTATATATGGACATATTGCCTTAATTCTTGGCATTAATGCCAATCCTGTGTTTGCAAAAGATGCATCAAGTGAAGCAGTTTCAGATAATGACACTGAACAGGATGACGGAAAAATAGTTGAAGCCGAAAAGCTCTTCCTTTCTGCAGTACAAGAAGCTAAAGAAGGTTTTGGCCAGAGAGACCCACATGTTGCATCGGCATGCAACAATCTGGCTGAGTTGTACAGAATAAAAAAGGCATTTGACAAAGCAGAACCGCTGTATTTGGAAGCTATTAACATATTGGAGGAATCATTTGGCCCTGAAGATATACGCGTGGGGGCTGCTGCTCACAACCTTGGGATGTTCTACCTTGGACAGCGGAAGTTGGAAGAAGCGCATGTTTACTATGCGGTGCTGTATCTccaaggaaaagaaagggatgCTGAGGCCTTTATTCAGGACTCTATAAGAATGCTTGAGgAAGCTGGTGAAGGGGAGTCCTTTATATGCATTAGAAGATTGCGGTACCTCTCTCAGATATATGTGAGATCACATCGTCTCGCTGAAGCTGAGATAGTCCAAAGAAAGATCCTGCATATAATGGAACTATCCAAGGGATGGAAATCCTTGGACACTGTTAATGCTGCTGAAAGCTTGGCTCTGACTCTGCAAGCATTTAATAACTTGAAAGATTCTCAAGAGCTTCTTGAAAGATGTCTTGATGCCCGGAAAGCCGTACTACCTGGTGATCACATTCAGATTGCTGCAAACCTGCTTCATCTAGCAAGGGGGATAGTGCTTAACAGCAGCCAACTGCAAGTATGTGATGCTTCTAGAGAGGCTGGGTTTGATAAGGCAAAGGATCATTTGAATGATTCCACCAGCACTACATGGTTTATGAATTTAGTTACTCTCAATCTGATCCCTACATCTGCAGCAAATTCTGGAAGTGAATATGAGGGCAAGTTTGATTATATCAAAATAAACATCAATGACAAGGACTTCCCCATTTTCATTCATATTTTACCCTACAACTACGGTGATTTGGAGGACCTAAGCAGCAGTTGTCAAACTCACCAGGGAGTTCTGCTTGCTGAGGGACAGATTTTATGGAAGCTTGGAACAGGGTGTATTAATGGGAGTTCTGGGAGATCAGCTTTCCTGAAGATGGGATCTTTGAGTGAACTAGCAGAACCAGGAGGGCATATAAATCTTGAGGCTCGGGAGGCACTTCGTCAGTGTGTTCTTGCTTACAGGAAGTATGGATCTGAGAAGTCAATTGCTGATACCCCTGAAATAAAGAAAGAGTATCTTTCATGTATAAAGTGTGCTCAAAACGTGCTTGGTGGTAAATTTGCTGAAGAGACAACCAATGAGAAGGATTTCAGAAGTTGA 1569 0.4226 MSLRLVAANLIKRFRFPARDARSASVRNSKASPISLSGEVYTSHWHGSGAYGWRIDPRDPRLWIVIYGHIALILGINANPVFAKDASSEAVSDNDTEQDDGKIVEAEKLFLSAVQEAKEGFGQRDPHVASACNNLAELYRIKKAFDKAEPLYLEAINILEESFGPEDIRVGAAAHNLGMFYLGQRKLEEAHVYYAVLYLQGKERDAEAFIQDSIRMLEEAGEGESFICIRRLRYLSQIYVRSHRLAEAEIVQRKILHIMELSKGWKSLDTVNAAESLALTLQAFNNLKDSQELLERCLDARKAVLPGDHIQIAANLLHLARGIVLNSSQLQVCDASREAGFDKAKDHLNDSTSTTWFMNLVTLNLIPTSAANSGSEYEGKFDYIKININDKDFPIFIHILPYNYGDLEDLSSSCQTHQGVLLAEGQILWKLGTGCINGSSGRSAFLKMGSLSELAEPGGHINLEAREALRQCVLAYRKYGSEKSIADTPEIKKEYLSCIKCAQNVLGGKFAEETTNEKDFRS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1685 522 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 453 507 - -
Sto5g1685 522 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 356 - -
Sto5g1685 522 Pfam Tetratricopeptide repeat 130 194 - -
Sto5g1685 522 SUPERFAMILY TPR-like 196 300 IPR011990 GO:0005515
Sto5g1685 522 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 453 507 - -
Sto5g1685 522 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 356 - -
Sto5g1685 522 Pfam Tetratricopeptide repeat 271 309 - -
Sto5g1685 522 Gene3D Tetratricopeptide repeat domain 195 363 IPR011990 GO:0005515
Sto5g1685 522 Gene3D Tetratricopeptide repeat domain 95 194 IPR011990 GO:0005515
Sto5g1685 522 SUPERFAMILY TPR-like 101 195 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1685 - - ccaj:109796654 458.373