Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1671 ATGCCACACCCAACTCAAGTGGTGGCGCTGCTCAAAGCGCAGCAAATCCGGCATGTTCGGTTGTACAACGCGGACCAATCCATGCTGGTTGCGCTTGCAAAGACAGGCATTGAGGTTGTTGTGACTGTCCCAAATGAAGAGCTTCTAGCAATAGGCCAATCAAACTCCACAGCAGCCAATTGGGTTTCCCACAATGTGGTAGCACACTATCCATCCACCAACATCACAGCCATTTGTGTCGGATCCGAGGTTGTCACAACCCTCCCGAACGTGGCCAAACTCCTTGTCAGTGCCCTCAAGTACATCCACTCGGCCCTCGTAGCTTCCAACCTCGATTCCCACATCAAAGTCTCATCCCCCTTCCCTTCCTCCATCATCCTTGACTCCTTCCCACCCTCTCAGGCCTTCTTCAATCGGTCTTTGAACCCGGTTTTAGTCCCATTGCTCGATTTCTTGCAGTCCACGGAGTCCTACTTCATGCTCAATGTGTATCCTTACTATGATTACATGCAATCCAATGGTGTGATTCCATTAGACTATGCACTCTTCAAGCCTCTCCCTCCGAACAAAGAAGCCGTGGACTCGAACACACTCCTACACTACTCCAATGTCTTTGATGCCGTGGTTGATGCAGCCTACTTCGCCATGTCCTTCCTCAACTTCACCAACATTCCTGTGGTGGTCACAGAGTCAGGATGGCCCTCTCGAGGCGATCCTTCGAGTGAGCCTGATGCCACGGTGGACAATGCTAATACTTACAATAGCAATTTGATCAAACATGTGCTGAACAAAACTGGGACACCAAAACATCCTGGGATTGCTGTTAGTACTTTCATTTATGAGCTGTACAACGAGGATTTGAAGCCCGGGCCGGTGTCCGAGAAGAACTGGGGCTTGTTTGATGCCTATGGGAAACCTGTTTATGTGTTGCATTTGACAGGATCAGGAGCTGTTTTGGCTAATGACACTACTAATCAGACTTTTTGTATTGTGAAAGATGGTGCTGATGGTAAGATGGTGCAGGCAGCACTGGATTGGGCTTGTGGGCCTGGGAAAGTGGATTGTTCTATATTGCTTCAGGGACAAGATTGTTATGAACCAGACAATGTGATGGCACATGCAAATTTTGCTTTTGATGCTTACTATGTTAAGATGGGAAAGTCTCCTGAGGCTTGTGACTTCAATGGAGTGGCCACAGTCTCAACCTCTGATCCAAGTAATTAG 1224 0.4828 MPHPTQVVALLKAQQIRHVRLYNADQSMLVALAKTGIEVVVTVPNEELLAIGQSNSTAANWVSHNVVAHYPSTNITAICVGSEVVTTLPNVAKLLVSALKYIHSALVASNLDSHIKVSSPFPSSIILDSFPPSQAFFNRSLNPVLVPLLDFLQSTESYFMLNVYPYYDYMQSNGVIPLDYALFKPLPPNKEAVDSNTLLHYSNVFDAVVDAAYFAMSFLNFTNIPVVVTESGWPSRGDPSSEPDATVDNANTYNSNLIKHVLNKTGTPKHPGIAVSTFIYELYNEDLKPGPVSEKNWGLFDAYGKPVYVLHLTGSGAVLANDTTNQTFCIVKDGADGKMVQAALDWACGPGKVDCSILLQGQDCYEPDNVMAHANFAFDAYYVKMGKSPEACDFNGVATVSTSDPSN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1671 407 SMART X8_cls 327 406 IPR012946 -
Sto5g1671 407 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 1 341 - -
Sto5g1671 407 Pfam X8 domain 328 399 IPR012946 -
Sto5g1671 407 Pfam Glycosyl hydrolases family 17 2 310 IPR000490 GO:0004553|GO:0005975
Sto5g1671 407 SUPERFAMILY (Trans)glycosidases 2 311 IPR017853 -
Sto5g1671 407 ProSitePatterns Glycosyl hydrolases family 17 signature. 224 237 IPR000490 GO:0004553|GO:0005975
Sto5g1671 407 Gene3D Glycosidases 1 316 - -
Sto5g1671 407 Gene3D - 321 407 - -
Sto5g1671 407 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 341 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1671 Sto-Chr5 11840635 11841858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1671 1 406 Glycoside Hydrolase AT1G66250 74.138 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1671 K19891 - gmx:100792634 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1671 5 11840635 11841858 Sto5g1671 5 11840635 11841858 CCT