Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1649 ATGGACGACGAGGTTCGGAAGATCTTCAATAAGTTCGACAAGAACGGCGACGGCAAGATCTCGTGCGAGGAGCTGAAGAAGATGCTGCTCACTCTCGACTCCAAAACGACGTCGAAGGAGATCAAGCGCATCATGGCGGAGATTGACAAGAACGGCGACGGCTACATCGATCTCAACGAGTTCGCCGATTTCCACCACCATTCTCCCGGAGGAGGAGGAGATCGTACGGTGGCCGCCGACGCAAGAGAGCTCCGCGACGCCTTCGATTTGTACGACCTGGACAAGAACGGACTGATCTCGGCGACCGAGTTGCACGCGGTGCTGCGCAAGCTAGGGGAGAAAGGATCCTTGAGCGATTGCCGGAAGATTATCAGCTCCGTCGACGCCGACGGCGACGGAAACGTCAATTTCGAGGAGTTCAAGAGGATGATGACTCGCGCCTAG 444 0.5653 MDDEVRKIFNKFDKNGDGKISCEELKKMLLTLDSKTTSKEIKRIMAEIDKNGDGYIDLNEFADFHHHSPGGGGDRTVAADARELRDAFDLYDLDKNGLISATELHAVLRKLGEKGSLSDCRKIISSVDADGDGNVNFEEFKRMMTRA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1649 147 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Sto5g1649 147 CDD EFh 4 66 IPR002048 GO:0005509
Sto5g1649 147 ProSiteProfiles EF-hand calcium-binding domain profile. 115 147 IPR002048 GO:0005509
Sto5g1649 147 ProSiteProfiles EF-hand calcium-binding domain profile. 79 114 IPR002048 GO:0005509
Sto5g1649 147 SUPERFAMILY EF-hand 4 145 IPR011992 -
Sto5g1649 147 CDD EFh 83 145 IPR002048 GO:0005509
Sto5g1649 147 ProSitePatterns EF-hand calcium-binding domain. 128 140 IPR018247 -
Sto5g1649 147 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 147 - -
Sto5g1649 147 Gene3D - 72 147 - -
Sto5g1649 147 SMART efh_1 4 32 IPR002048 GO:0005509
Sto5g1649 147 SMART efh_1 83 111 IPR002048 GO:0005509
Sto5g1649 147 SMART efh_1 119 147 IPR002048 GO:0005509
Sto5g1649 147 SMART efh_1 40 68 IPR002048 GO:0005509
Sto5g1649 147 ProSitePatterns EF-hand calcium-binding domain. 92 104 IPR018247 -
Sto5g1649 147 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
Sto5g1649 147 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Sto5g1649 147 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Sto5g1649 147 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 147 - -
Sto5g1649 147 Gene3D - 1 70 - -
Sto5g1649 147 Pfam EF-hand domain pair 4 64 IPR002048 GO:0005509
Sto5g1649 147 Pfam EF-hand domain pair 83 144 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1649 Sto-Chr5 11680564 11681007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1649 3 145 EF-hand Containing Proteins AT1G18210 51.049 1.40e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1649 K13448 - gmx:100806813 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1649 5 11680564 11681007 Sto5g1649 5 11680564 11681007 CCT