LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g1647	ATGGCTTCGTCGGTGCCTACGAACATGGATGCCTCGAACAGTGCATCCTCAGTGTCCCATTTAGCACAAGCTTCGTCTTCAACTCCTTCTGCTCAACCTTCGCTTCCCATTGCTTCACCAGTTCCAACCGGAGAAGCTTCTGCGCCAGCTCAGAGCACAGCCACGTCTGCTTCTACTAGTCGTATTCTAGATCAAGTGAAGCATAAAAATCTATTGCAAGAGTATGCTCAAAAGTCAAACATACCGTTTCCAATTTATCAGACCTTGAACGAGGGACTTCCGCACGCTCCAAAATTTAGGTCAGTAGTTTTTATTGAAGGAAAACAATATATCAACCCAAATTGTTTCCCTAGTCGAAAAGCTGCGGAACAGGCAGTTGCCAAACTTGCTATGGAAAGCATCTCAAGAAATATACAAACTGAAGTGCTTCCCCTTGTTCATGAGGAAACTGTCACCCAGAAACAAATGTTTTGCAAGAATATTTTACATGAATTTGCTGTCAAGATGCAactaaataaagtaaaatatgaGACTGCTAAGCGGGGAGATCTTCCTGTTTTTGTATCGGCTGTGGTTTTTCGTGGTCAACTCTACACCGGTGAAGCTAAAAGCAAAAAGGAGGCTGAGCAATTAGCAGCACGTGCTGCTATTCTTGCAAATCTAGACAGCTCCCCGTCTGGAATATGTCTTACAGAGATAATAAAGTCAAAATTCAAGCACTGTTCTGCTACTGCAATTGAAAGTGTGAAGGATTCACAATATAGTAATACTGTATCGCCTGTACCTAATGCAGGACATGCCTCTGTTGGTGCAGCTGTTGTGGCTGCTGCTGATAATGAAATGCAGGTTGCACATCCCCAATGTTCTTCTATTGTGCCTCCACCAAGGCAAGAACTTCAGATGCCAAAACAAGAAATATCCATTGAAGAATCTAAACTATCCGAGGATGTGTCTCTGCAAGCAGGTGCCCTACAGCAGCAGATTGATGATTGTTTAAGTTCTAAAAAGCGGAAAAGGAACAAAAGAAAGGCTAATAAGAAGTCCCGGCATAATAATCTGCCACCGGTTGGTACATTCTCTCTCAACGAAGTCCCTCCTCCTTCAGCTGCACTTTCTGTGATTGAAGTCCCTGCTTGTTCAGTGGCGCAGTAA	1152	0.4314	MASSVPTNMDASNSASSVSHLAQASSSTPSAQPSLPIASPVPTGEASAPAQSTATSASTSRILDQVKHKNLLQEYAQKSNIPFPIYQTLNEGLPHAPKFRSVVFIEGKQYINPNCFPSRKAAEQAVAKLAMESISRNIQTEVLPLVHEETVTQKQMFCKNILHEFAVKMQLNKVKYETAKRGDLPVFVSAVVFRGQLYTGEAKSKKEAEQLAARAAILANLDSSPSGICLTEIIKSKFKHCSATAIESVKDSQYSNTVSPVPNAGHASVGAAVVAAADNEMQVAHPQCSSIVPPPRQELQMPKQEISIEESKLSEDVSLQAGALQQQIDDCLSSKKRKRNKRKANKKSRHNNLPPVGTFSLNEVPPPSAALSVIEVPACSVAQ	383

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g1647	383	SUPERFAMILY	dsRNA-binding domain-like	156	229	-	-
	Sto5g1647	383	MobiDBLite	consensus disorder prediction	333	364	-	-
	Sto5g1647	383	SUPERFAMILY	dsRNA-binding domain-like	64	134	-	-
	Sto5g1647	383	Pfam	Double-stranded RNA binding motif	159	217	IPR014720	-
	Sto5g1647	383	Pfam	Double-stranded RNA binding motif	69	132	IPR014720	-
	Sto5g1647	383	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	67	136	IPR014720	-
	Sto5g1647	383	MobiDBLite	consensus disorder prediction	45	60	-	-
	Sto5g1647	383	MobiDBLite	consensus disorder prediction	1	60	-	-
	Sto5g1647	383	SMART	DRBM_3	68	135	IPR014720	-
	Sto5g1647	383	SMART	DRBM_3	158	221	IPR014720	-
	Sto5g1647	383	Gene3D	-	139	223	-	-
	Sto5g1647	383	Gene3D	-	45	138	-	-
	Sto5g1647	383	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	157	217	IPR014720	-
	Sto5g1647	383	PANTHER	DOUBLE-STRANDED RNA-BINDING PROTEIN 4	48	345	-	-
	Sto5g1647	383	PANTHER	RIBONUCLEASE III	48	345	IPR011907	GO:0003723\|GO:0004525\|GO:0006364
	Sto5g1647	383	CDD	DSRM_SF	163	217	-	-
	Sto5g1647	383	MobiDBLite	consensus disorder prediction	1	34	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g1647	Sto-Chr5	11640482	11643856	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g1647	-		-	vvi:100257098	198.749

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g1647	5	11640482	11643856	Sto5g1647	5	11640482	11643856	CCT