Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1613 ATGGCGGCTGCTAGGGAAATTGGGGTGGCCGAATTCCTTCAGGGTACCTGCAGACAAAGTCTGTTTTTAGTGAAAAAATCTCAAAGGCAGAGGAGTCATTTGCTTTGGGGTACGGTTTCACCGAGAAGTCAGGTTCTGGGATCAACTAGAAAAGCCTTATCTTTGAGGTGCCGTGCTCGAACAAATTCTGGAGCTGTGGTTTCCGGGGGTGTAAGTAGTTCAGTAGATGAGCAGTCCAGTTTGGTTGAGAAGCCTGCCTTGGAAGTTTTGCATTTTTATCGGGTTCCATTTATTCAAAGAAGTGCGGCTGCTGAACTTCTCAAGGATGTTCAAATGAAAATCTCAGATCAGATTGTGGATTTGCAAACAGAGCAATGTTTCAATATTGGGCTCGATTCACAATTTTCGAATGAAAAGATTTCTGTCCTGAAATGGCTTCTTCAAGAAACATATGAACCTGATAATTTGGGAACTGAGAGCTTTCTTGAGAAAAAGGGTAAAGAAGGTTTGAGCACTGTTATAATAGAGGTTGGCCCTAGGTTGTCATTTACCACAGCATGGTCTACTAATGCTGTTGCAATTTGCCGAGCATGTGGATTAACAGAGGTGACACGTTTGGAACGTTCAAGGAGGTACTTGTTGTACACCAAGGGTGAATTGCAAGATTATCAGATTAATGAGTTTGCAGCAATGGTACATGATAGAATGACTGAATGTATTTATACTCAGAAGCTAACATCCTTTCAGACCACTGTAGTTCCAGAGGAAGTCCGTTATATACCTGTCATGGAAAAGGGGCGAAAAGCATTAGAAGAAATTAATCAGGAAATGGGATTATCCTTTGATGACCAGGATCTACAATACTATACTAAACTTTTCAGAGAGGATATTAAGCGTGATCCAACAAATGTTGAATTATTTGATATTGCACAGTCAAACAGTGAGCATAGCAGGCACTGGTTTTTTACCGGGAAAATTTTCATTGATGGACAACTCATGAATAGGACTCTAATGCAGATTGTGAAAAGCACTTTACAAGCTAATCCAAATAATTCAGTTATTGGatttaaggataactctagtGCAATAAGGGGTTTCCAAGTGAAGCAGTTGCGGCCTGTGCAGCCTGGTTCAACTTGTCCATTGGACACTATAGCACGTGAGCTAGATATATTATTTACTGCTGAAACACATAATTTTCCATGTGCAGTGGCACCTTATCCTGGCGCAGAGACGGGTGCAGGAGGTCGAATTAGGGATACACATGCAACAGGAAGGGGTTCTTTTGTCCAAGCAGCTACTGCTGGTTATTGTGTTGGAAATCTCCACATCCCAGGGTCTTATGCTCCATGGGAAGATTCATCCTTTAATTATCCATCTAATTTAGCATCCCCTTTGCAGATCCTCCTAGATTCTAGTAATGGTGCATCTGACTATGGCAACAAATTTGGAGAGCCATTGATTCAGGGCTTTTGTAGAACTTTTGGAATGAGACTTCCTAGTGGGGAAAGGCGAGAATGGTTGAAGCCAATTATGTTTAGTGGAGGCATTGGCCAAATTGACCACATCCATATATCAAAGGGAGAGCCTGACATAGGAATGTTAGTTGTGAAGATTGGAGGCCCTGCCTATCGTATTGGGATGGGAGGTGGGGCTGCCTCAAGCATGGTTAGTGGTCAGAATGATGCAGAGCTTGATTTCAATGCTGTGCAACGTGGAGATGCTGAGATGGCTCAAAAATTGTATCGTCTTGTTCGTGCCTGTATTGAGATGGGGGATAAAAATCCAATTATCAGCATTCATGATCAGGGGGCTGGTGGGAATTGCAATGTTGTGAAGGAAATTATATACCCAAAGGGTGCTGAAATAGATATCCGAGCAATAGTggttggtgatcacacaatgtCTGTTTTAGAAATTTGGGGTGCAGAATATCAAGAGCAGGATGCAATCTTGGTTAAGCCTGAAAGTCGCAACCTTTTACAATCAATCTGTAACAGGGAAAAGGTTTCAATGGCTGTGATTGGAACTATTAGTGGTGATGGACGGGTTACTTTAGTTGACAACTTAGCAACTCAGAAGTGTATTTCGAATGGACTTCCTCCACCTCCCCCTGCTGTGGATCTTGAACTAGAGAAAGTACTTGGTGACATGCCTCagaaatcttttaaatttaaccGGGTTGTTTATGAGAGAGATCCATTTGATCTAGCCCCACAGGTCACAGTAATAGATTCTTTGAAAAGGGTATTGAGTTTACCATCTGTCTGCTCAAAACGGTTCTTGACAACAAAAGTTGATAGGTGTGTTACTGGTCTTGTGGCACAACAGCAAACGGTTGGCCCTCTACAGATTCCCCTTGCTGATGTTGCAGTTATTGCTCAGACTTTTACTGATGTGACTGGAGGTGCATGTGCCATTGGAGAGCAACCAATCAAAGGTTTGATAGACCCCAAAGCAATGGCAAGATTGGCTGTTGGTGAAGCACTCACTAATCTTGTATGGGCAAAAGTCACTTCCCTATCTGATGTTAAAGCAAGCGGTAATTGGATGTATGCTGCCAAGCTTGATGGTGAAGGAGCTTCCATGTACGATGCTGCTATATCTTTATCAGAAGCAATGATTGAACTCGGTATTGCAATTGATGGAGGGAAGGATAGCCTTTCTATGGCTGCCCATGCTGGAGGTGAAGTTGTCAAGGCTCCAGGAAACCTTGTAATCAGTGTTTATGTCACTTGTCCTGATATTACAAAAACAGTGACACCAGACTTGAAACTTGAAGATGATGGTATTTTGCTTCATATTGATCTGGCAAAGGGAAAGAAGCGATTAGGTGGATCTGCTCTTGCCCAGGCTTTTGACCAAATTGGGGATCAGTGCCCTGATCTTGATGATGTTCCTTATTTTAAAAAGGCTTTTGAGGCTGTCCAAGACCTTCTTACAGATGAATTGATATCTTCTGGTCATGACATAAGTGATGGTGGGTTGTTGGTTAGTGCCTTGGAGATGGCATTTGCTGGGAATTGTGGGTTTATCTTGAACTTAAATTCCAAAGGGAATGGCCTTTTCCAAACACTATATGCAGAAGAGCTTGGTTTGATTGTTGAGGTAAGCAAGAAAAATTTGGATACTGTGATGGATAAGTTGAACCATGCAGGTGTTATTGGTGAGATCATAGGACAAGTCACTTCTGCTCCATTGATAGCAGTTAAGGTTGATGGGGTGACTCATCTAGAAGAGAAAACTTCTATCCTCAGGGATATGTGGGAAGAACCCAGTTTTCAGCTGGAAAAGTATCAAAGATTGGCATCTTGTGTTGATATGGAGAGAGAAGGATTAAAACATCGATATGCCCCTTCGTGGAAACTGTCCTTTTCTCCTTCCTTCACTGATAGAAAGTACATGTCTGCAACTGCAAAACCAAAAGTTGCTGTGATTAGAGAAGAAGGCAGCAACGGAGATAGAGAAATGGCTGCAGCATTTTATGCTGCTTGTTTTGAACCATGGGATGTTACCATGTCAGACCTTCTTAATGGGGTAATCTCATTGCAGGAGTTCCGTGGAATTGTGTTTGTTGGTGGATTTAGCTATGCTGACGTGCTTGATTCTGCCAAAGGATGGTCTGCTTCTATAAGATTCAATGAGCCCATTATAAAGCAATTTCAAGAGTTTTACAACCGTCCGGACACTTTCAGTCTTGGGGTTTGCAATGGTTGTCAACTAATGGCTTTACTGGGATGGGTACCTGGGCCACAAGTTGGAGGTGTTCTTGGTGCTGGTGGGGACCTATCACAACCAAGGTTCATTCACAATGAGTCTGGGCGGTTTGAGTGCCGCTTTACAAGTGTGACTATAAAAGACTCACCAGCTATAATGTTTAAAGGTATGGAGGGAAGTACACTTGGGGTATGGGCTGCTCATGGCGAGGGAAAAGCATATTTCCCAGATGAAGGTGTGCTGGATCGTATTGTTCATTCAGAGTTAGCTCCTGTTAGATACTGTGATGATGGTGGCAATCCAACAGAGATATATCCTTTCAATGTGAATGGTTCTCCTCTAGGGGTTGCAGCTATTTGTTCTCCTGATGGGCGTCATCTTGCCATGATGCCTCATCCAGAGCGTTGCTTCTTAATGTGGCAATTCCCATGGTATCCGAAGCAATGGGATGTGGACAGGAAGGGGCCTAGTCCATGGTTGCGCATGTTCCAGAATGCTAGAGAGTGGTGTTCTTGA 4233 0.4245 MAAAREIGVAEFLQGTCRQSLFLVKKSQRQRSHLLWGTVSPRSQVLGSTRKALSLRCRARTNSGAVVSGGVSSSVDEQSSLVEKPALEVLHFYRVPFIQRSAAAELLKDVQMKISDQIVDLQTEQCFNIGLDSQFSNEKISVLKWLLQETYEPDNLGTESFLEKKGKEGLSTVIIEVGPRLSFTTAWSTNAVAICRACGLTEVTRLERSRRYLLYTKGELQDYQINEFAAMVHDRMTECIYTQKLTSFQTTVVPEEVRYIPVMEKGRKALEEINQEMGLSFDDQDLQYYTKLFREDIKRDPTNVELFDIAQSNSEHSRHWFFTGKIFIDGQLMNRTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFQVKQLRPVQPGSTCPLDTIARELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLHIPGSYAPWEDSSFNYPSNLASPLQILLDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSGGIGQIDHIHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRNLLQSICNREKVSMAVIGTISGDGRVTLVDNLATQKCISNGLPPPPPAVDLELEKVLGDMPQKSFKFNRVVYERDPFDLAPQVTVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTFTDVTGGACAIGEQPIKGLIDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGASMYDAAISLSEAMIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVISVYVTCPDITKTVTPDLKLEDDGILLHIDLAKGKKRLGGSALAQAFDQIGDQCPDLDDVPYFKKAFEAVQDLLTDELISSGHDISDGGLLVSALEMAFAGNCGFILNLNSKGNGLFQTLYAEELGLIVEVSKKNLDTVMDKLNHAGVIGEIIGQVTSAPLIAVKVDGVTHLEEKTSILRDMWEEPSFQLEKYQRLASCVDMEREGLKHRYAPSWKLSFSPSFTDRKYMSATAKPKVAVIREEGSNGDREMAAAFYAACFEPWDVTMSDLLNGVISLQEFRGIVFVGGFSYADVLDSAKGWSASIRFNEPIIKQFQEFYNRPDTFSLGVCNGCQLMALLGWVPGPQVGGVLGAGGDLSQPRFIHNESGRFECRFTSVTIKDSPAIMFKGMEGSTLGVWAAHGEGKAYFPDEGVLDRIVHSELAPVRYCDDGGNPTEIYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQWDVDRKGPSPWLRMFQNAREWCS 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1613 1410 CDD GATase1_FGAR_AT 1143 1406 - -
Sto5g1613 1410 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 89 1410 IPR010073 GO:0004642|GO:0006189
Sto5g1613 1410 SUPERFAMILY PurS-like 90 248 IPR036604 -
Sto5g1613 1410 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 270 319 IPR041609 -
Sto5g1613 1410 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 126 244 IPR040707 -
Sto5g1613 1410 SUPERFAMILY PurM N-terminal domain-like 741 921 IPR036921 -
Sto5g1613 1410 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 92 1408 IPR010073 GO:0004642|GO:0006189
Sto5g1613 1410 SMART GATase_5_2 1140 1409 - -
Sto5g1613 1410 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1142 1386 - -
Sto5g1613 1410 PANTHER - 56 1409 - -
Sto5g1613 1410 Gene3D - 314 520 IPR036921 -
Sto5g1613 1410 CDD PurL_repeat2 789 1062 - -
Sto5g1613 1410 SUPERFAMILY FGAM synthase PurL, linker domain 253 320 - -
Sto5g1613 1410 SUPERFAMILY PurM N-terminal domain-like 321 528 IPR036921 -
Sto5g1613 1410 SUPERFAMILY PurM C-terminal domain-like 928 1124 IPR036676 -
Sto5g1613 1410 Pfam CobB/CobQ-like glutamine amidotransferase domain 1140 1409 - -
Sto5g1613 1410 Pfam AIR synthase related protein, C-terminal domain 943 1071 IPR010918 -
Sto5g1613 1410 Pfam AIR synthase related protein, C-terminal domain 533 687 IPR010918 -
Sto5g1613 1410 CDD PurL_repeat1 305 689 - -
Sto5g1613 1410 SUPERFAMILY Class I glutamine amidotransferase-like 1138 1409 IPR029062 -
Sto5g1613 1410 Gene3D - 731 913 IPR036921 -
Sto5g1613 1410 Gene3D - 521 695 IPR036676 -
Sto5g1613 1410 Gene3D - 914 1085 IPR036676 -
Sto5g1613 1410 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 56 1409 - -
Sto5g1613 1410 SUPERFAMILY PurM C-terminal domain-like 530 764 IPR036676 -
Sto5g1613 1410 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 253 313 - -
Sto5g1613 1410 Gene3D - 1086 1410 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1613 Sto-Chr5 11295171 11299701 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1613 K01952 - gmx:100818572 2456.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1613 5 11295171 11299701 Sto5g1613 5 11295171 11299701 ECH