Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1601 ATGAGTGCACATATTGTCTTGGATCATGTTCTAAAGGATATACTCAAGGTGCTCACACCCTTACAAGCAGATTGGGTGATACGGTTTGAGATTATTGAGGATTTACGAAAAGTCGTTGAATCTGTGGAAAGTTTTAGAGGTGCAACTATTGAGCCATTTGGATCATTTGTGTCAAATCTCTTCACACGATGGGGTGACTTGGATATATCAATTGAACTACCAAATGGTTCACACATCTCATCTGCAGGTAAAAAACGCAAACAAACGTTTTTGGGGGATCTCCTAAAAGCTTTGAAGATGAAAGGTGGGTTGAGAAGCTTGCAGTTCATCTCCCATGCTCGGGttcccattttaaaatttaaaagcaaCCGCCAGGGTATATCTTGTGATATTTCAATTGATAACCTTCTGGGCCATATGAAGTCCAAGCTTTTGCTTTGGATCAGCATGATGGATGGCCGCTTTCGTGATATGGTTTTACTGGTCAAAGAATGGGCCAAAGCACATAAAATCAATAACTCAAAAACTGGGACTTTCAACTCCTATTCCCTTAGTTTACTTGTGATCTTTCACTTTCAGACATGTGATCCGGCGATTTTCCCACCACTTAAAGATATATACCCTAGCAATTTGGTTGATGATCTTATAGGTGTCAGGGCTGACACAGAGAAACTGATTGAAGAAACATGTCATGCTAACATAAAAATGTTCATATCAAACAGATTCAGGCCAAAGAATCGGAAATCTTTGTCTCAACTTTTCCTTGAATTCCTAGAAAAGTTTCGTGACATTAATACAAAGGCAGCAGTGGAGGGGATTTGCCCATACAATGGACAGTGGGAACAGATATATAATAACACAAGATGGTTGCCCAAGACTTATGCTATATTTATTGAGGATCCTTTTGAGCAGCCAGCAAATTCTGCAAGGTCTGTCAGCACAGGACAGCTTTCAAAGATATCCGAGGCTTTTGAATCAACACACCGCAAACTTATCTCAGAGAATATGAATCGAAATTCTCTCTTACAAGAATTAGCACAACCACATGTGTCACAATTTATCAGAGCACCAATGATCCCGAGTTACAATGGTGGCCACTATCATCACCCACCTCAGCCACAGCCACAGCCACAGGTACACAGAGCAAAGATGCGTCCACAATCACAGAGACATAGCCATTTTCAACGTAAGAATCAGGAATCACACTCCAACAACAAAACCAACACCAGTAGCAACAGTTCAAATACAAGTAGACATGTGCAGGTACCTCAACGCCAGCAAGTATGGAGGCAAAAGGTCCAATAA 1305 0.4046 MSAHIVLDHVLKDILKVLTPLQADWVIRFEIIEDLRKVVESVESFRGATIEPFGSFVSNLFTRWGDLDISIELPNGSHISSAGKKRKQTFLGDLLKALKMKGGLRSLQFISHARVPILKFKSNRQGISCDISIDNLLGHMKSKLLLWISMMDGRFRDMVLLVKEWAKAHKINNSKTGTFNSYSLSLLVIFHFQTCDPAIFPPLKDIYPSNLVDDLIGVRADTEKLIEETCHANIKMFISNRFRPKNRKSLSQLFLEFLEKFRDINTKAAVEGICPYNGQWEQIYNNTRWLPKTYAIFIEDPFEQPANSARSVSTGQLSKISEAFESTHRKLISENMNRNSLLQELAQPHVSQFIRAPMIPSYNGGHYHHPPQPQPQPQVHRAKMRPQSQRHSHFQRKNQESHSNNKTNTSSNSSNTSRHVQVPQRQQVWRQKVQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1601 434 Gene3D - 152 328 - -
Sto5g1601 434 SUPERFAMILY Nucleotidyltransferase 6 149 IPR043519 -
Sto5g1601 434 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 427 - -
Sto5g1601 434 Pfam Nucleotidyltransferase domain 35 106 IPR002934 GO:0016779
Sto5g1601 434 PANTHER PROTEIN HESO1 1 427 - -
Sto5g1601 434 Gene3D Beta Polymerase, domain 2 30 151 IPR043519 -
Sto5g1601 434 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 343 - -
Sto5g1601 434 MobiDBLite consensus disorder prediction 360 434 - -
Sto5g1601 434 CDD NT_PAP_TUTase 27 149 - -
Sto5g1601 434 MobiDBLite consensus disorder prediction 401 434 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1601 - - gmx:100800950 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1601 5 11213236 11218486 Sto5g1601 5 11213236 11218486 ECH