Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto5g1597 | ATGAATGGCGGGGGAAGCGAAGCGCGAGGTCACGCCGCCGCATTGCAAGAGCTCAAGGTGTACATGTGTGGTTACCTTCCTGGAGCTCTCCCGCAGAGGTCGCCGCTATTGACGCCGATGCTTGTTAGGGTTCCGCCGTCGGTTGGCTCTGCTGCTGGTTACTCATGGAAGGATGTTTGCGGTGGCGGTTGTGGATTCGCCATGGCTATTTCTGAGTCAGGAAAGCTCATCACATGGGGTTCAACAGATGATCTAGGTCAAAGCTATGTAACATCTGGCAGGCATGGGGAAATTCCTGAGCCTTTCCCTCTTCCAACTGATGCTTCTATCATAAAGGCTGCAGCTGGATGGGCACATTGTGTTGCTGTCACAGATGGTGGTGAAGTTTACACCTGGGGATGGAAGGAATGTGTTCCATCTGGGAAGGTATTTGGTGAAGTATCATCTGGGATAAGTCAGGAAAAGGATGTATCAGAAAGGCAGAGTTCATTATTGACAGAGCAAGTTAGCCCTTGCTCTCAAGGCTCAAGATCAACTGGAGGAACTGTCTCCAGTGCTAGTGGAGAAGAAAGTACAAAGCGAAGGAGAGTATCTTCAGCGAAACAAACAGCTGACAGCTCAACATGTGGTGATGAGTCTCTGACAGCTTTCCCATGTCTCGTCACACTAAACCCAGGGGTAAGGATAACAAGTGTTGCTGCTGGAGGACGCCATACCCTAGCATTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTACGGAGGTGAAGGGCAGCTCGGTTTGGGCTCCAGAATACGCATGGTGTCCTCTCCTCATCTTGTTCCTTGCATTGATTCCTCTACATGTGGAAAAGATAGATCTGTAGCACTTGCCCAGGGAAGCATGAATTTTGAGGGACATAATTTTAGAGTTCTTGGGAGTTATGTAAAGAGAATTGCTTGTGGAGGTCGGCACAGTGCAGTTATCACAGATACGGGAGCTTTGCTTACTTTTGGTTGGGGACTATATGGACAGAAGTGTGGGCAAGGAAGTACAGATGATGAGCTAAGCCCAACTTGCGTATCTTCCTTATTGGGGATCCAAATAGAGGGAGTTGCTGCAGGACTATGGCATACAGTCTGTATATCTGCTGATGGTGATGTATATGCGTTTGGTGGAAACCAGTTTGGGCAGTTGGGAACCGGTGATGATCAAGCTGAGATTCTCCCAAGGCTGCTGGATTCTCCAAGCTTGGAAAACAGACATGCTAAGATCATATCTTCTGGGGCTCGCCATACTGCTGTAATAACAGAGGATGGAAAAGTTTTTTGCTGGGGATGGAACAAGTATGGCCAGCTTGGTCTTGGGGATGTGATTGACCGTAATATTCCTTCTCAAGTCACCGTTGAAGGATGTACCCCTAAAAATGTTGCATGTGGCTGGTGGCATACTCTTCTTCTGGCCGAGTCACCCACCTGA | 1458 | 0.4883 | MNGGGSEARGHAAALQELKVYMCGYLPGALPQRSPLLTPMLVRVPPSVGSAAGYSWKDVCGGGCGFAMAISESGKLITWGSTDDLGQSYVTSGRHGEIPEPFPLPTDASIIKAAAGWAHCVAVTDGGEVYTWGWKECVPSGKVFGEVSSGISQEKDVSERQSSLLTEQVSPCSQGSRSTGGTVSSASGEESTKRRRVSSAKQTADSSTCGDESLTAFPCLVTLNPGVRITSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCIDSSTCGKDRSVALAQGSMNFEGHNFRVLGSYVKRIACGGRHSAVITDTGALLTFGWGLYGQKCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCISADGDVYAFGGNQFGQLGTGDDQAEILPRLLDSPSLENRHAKIISSGARHTAVITEDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTVEGCTPKNVACGWWHTLLLAESPT | 485 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto5g1597 | 485 | Gene3D | - | 8 | 161 | IPR009091 | - | |
| Sto5g1597 | 485 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 309 | 338 | - | - | |
| Sto5g1597 | 485 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 110 | 134 | - | - | |
| Sto5g1597 | 485 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 229 | 258 | - | - | |
| Sto5g1597 | 485 | MobiDBLite | consensus disorder prediction | 155 | 210 | - | - | |
| Sto5g1597 | 485 | MobiDBLite | consensus disorder prediction | 155 | 188 | - | - | |
| Sto5g1597 | 485 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 16 | 485 | - | - | |
| Sto5g1597 | 485 | SUPERFAMILY | RCC1/BLIP-II | 18 | 483 | IPR009091 | - | |
| Sto5g1597 | 485 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 433 | 483 | IPR000408 | - | |
| Sto5g1597 | 485 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN | 16 | 485 | - | - | |
| Sto5g1597 | 485 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 365 | 375 | IPR000408 | - | |
| Sto5g1597 | 485 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 326 | 378 | IPR000408 | - | |
| Sto5g1597 | 485 | Gene3D | - | 198 | 297 | IPR009091 | - | |
| Sto5g1597 | 485 | Gene3D | - | 298 | 485 | IPR009091 | - | |
| Sto5g1597 | 485 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 232 | 242 | IPR000408 | - | |
| Sto5g1597 | 485 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 379 | 432 | IPR000408 | - | |
| Sto5g1597 | 485 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 246 | 325 | IPR000408 | - | |
| Sto5g1597 | 485 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 312 | 322 | IPR000408 | - | |
| Sto5g1597 | 485 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 432 | 480 | IPR000408 | - | |
| Sto5g1597 | 485 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 378 | 429 | IPR000408 | - | |
| Sto5g1597 | 485 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 419 | 429 | IPR000408 | - | |
| Sto5g1597 | 485 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 74 | 126 | IPR000408 | - | |
| Sto5g1597 | 485 | PRINTS | Chromosome condensation regulator RCC1 signature | 229 | 242 | IPR000408 | - | |
| Sto5g1597 | 485 | PRINTS | Chromosome condensation regulator RCC1 signature | 248 | 264 | IPR000408 | - | |
| Sto5g1597 | 485 | PRINTS | Chromosome condensation regulator RCC1 signature | 365 | 381 | IPR000408 | - | |
| Sto5g1597 | 485 | PRINTS | Chromosome condensation regulator RCC1 signature | 381 | 395 | IPR000408 | - | |
| Sto5g1597 | 485 | PRINTS | Chromosome condensation regulator RCC1 signature | 473 | 485 | IPR000408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto5g1597 | Sto-Chr5 | 11178251 | 11183617 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto5g1597 | - | - | gmx:100778841 | 786.949 |
Event-related genes