Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1564 ATGGAAGCTTTATCGAAGAAGAAGCGAGATGGAGGTAGTAATAAGCCCGAGTCATTCACCGATTCCAGTACTGCCGAGTCAAGAGAAACGAGTTCGAGTGGATCGAGCTTATCCTCGGATTCGACCGTAGAAGCAAAAGCAAAAGGGTCTTctaattcttcttctcctcctcttggGTGGCCTATTCGGAAGGCCACTGTGTCAAAATCAAAATGTgatgagaagaaagaagaagaagaagaggacgaACAAATTGTAATTTCCCATCAGGACACCACCAAATTCAGCAGAATCGGTTCGAAACTGTcagAGATTGATATGATGAAGGAAAGGTTCGCGAAGCTTCTGCTAGGAGAGGATATGTCAGGGTCTGGAAAAGGGGTTTGCACTGCTTTGGCGATCTCAAATGCTATTACTAATCTCTGTGAGCCTCTTGCTGCTGAGAAGAAATCAATGTGGCGAAGAGAGATGGAGTGGCTTCTTTGTGTTAGTGATCACATTGTTGAATTAATGCCTTCTTGGCAAACATTTCCTGACGGAACCAAGCTTGAGGTAATGAGTTGCAGGCCAAGGTCAGATCTCTTTATGAATCTTCCAGCTCTTCGTAAACTAGATAACATGCTCCTCGAAATATTGGACAGTTTCACAAGTACAGAATTTTGGTACGTTGACCAAGGAATTGCAGCCCCAGATGCAGATGGCTCATCCTCTTTCCGCAAGACAATGCAAAGGCAAGAAGAGAAATGGTGGCTTCCTGTACCTCGAGTTCCCCCTTCAGGTCTCAGTGAGAACTCAAGAAAGCAATTGAACCACACACGAGAATGTGCTAACCAAATACTAAAAGCAGCCATGGCCATCAACGATAGTGCTCTTGCTGAGATGGAAGTTCCAGACTCGTACTTAGAAGCCCTTCCCAAGAATGGAAGAAGCTGCCTAGGGGATTTCATATACCGTTACATAACGTCAGATCAATTCTCTTCAGAGTGTCTGCTTGATTGTCTAGACCTTTCCTCTGAACATGTTGCTCTGGAGATTGCAAACAGAGTGGAAGCTTCCATGTATGTGTGGCGTCGAAGGGCTCATTCCAGACCCCCACCTAATCCTAACCGTTCAACAACAAAATCATCGTGGGAGATGGTGAAGGACTTCATGGCTGATGGAGACAAGAGAGAATTGCTTGCAGAAAGAGCCCAAAATTTCCTGCTTTCTTTGAAACAGAGGTTCCCTGGTTTAACTCAAACCACCCTCGACACTAGCAAGATCCACTGCAACAAGGATGTGGGGAAATCAATACTGGAGAGCTACTCAAGAGTGTTGGAGAGCATGGCGTTTAACATTGTGGCTCGCATAGATGATTTGGTGTATGTGGACGACTTGACGAAACATTCAGACAGGTTTCCTCTGGTTTCTTCCACAGTGTCTCGTCCATTCTCCATGTCTGTCTCAGGCACCCCTCAGAAACCTGTACGAGgtggaggtggtggtggtggtaatgGTGGCTCAACACCTAGATTTTCTCCTGCGGGATTGCCATTGATTAGTCCTGCAAAAGTGGAGAGAACTCCTTTCCTTAGCAACAACAACAGTAGCATCATCAAACCTCATCGTCGTGGGTTTGGGGTGAAGAGAGTATTGTCGAATTATCTTGGGGTGGACACGAAAGCCAAGATATGTAGCAACTCAACCGAGCTCAATTGTTCTTCCAATAAAACAGAATCATCGTGTGCCACCAAGAAATGA 1740 0.4328 MEALSKKKRDGGSNKPESFTDSSTAESRETSSSGSSLSSDSTVEAKAKGSSNSSSPPLGWPIRKATVSKSKCDEKKEEEEEDEQIVISHQDTTKFSRIGSKLSEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCEPLAAEKKSMWRREMEWLLCVSDHIVELMPSWQTFPDGTKLEVMSCRPRSDLFMNLPALRKLDNMLLEILDSFTSTEFWYVDQGIAAPDADGSSSFRKTMQRQEEKWWLPVPRVPPSGLSENSRKQLNHTRECANQILKAAMAINDSALAEMEVPDSYLEALPKNGRSCLGDFIYRYITSDQFSSECLLDCLDLSSEHVALEIANRVEASMYVWRRRAHSRPPPNPNRSTTKSSWEMVKDFMADGDKRELLAERAQNFLLSLKQRFPGLTQTTLDTSKIHCNKDVGKSILESYSRVLESMAFNIVARIDDLVYVDDLTKHSDRFPLVSSTVSRPFSMSVSGTPQKPVRGGGGGGGNGGSTPRFSPAGLPLISPAKVERTPFLSNNNSSIIKPHRRGFGVKRVLSNYLGVDTKAKICSNSTELNCSSNKTESSCATKK 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1564 579 MobiDBLite consensus disorder prediction 67 85 - -
Sto5g1564 579 Gene3D PRONE domain, subdomain 1 97 326 - -
Sto5g1564 579 Gene3D PRONE domain, subdomain 1 327 466 - -
Sto5g1564 579 MobiDBLite consensus disorder prediction 16 59 - -
Sto5g1564 579 MobiDBLite consensus disorder prediction 1 15 - -
Sto5g1564 579 MobiDBLite consensus disorder prediction 1 85 - -
Sto5g1564 579 ProSiteProfiles PRONE domain profile. 95 467 IPR005512 GO:0005085
Sto5g1564 579 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 20 560 - -
Sto5g1564 579 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 103 461 IPR005512 GO:0005085
Sto5g1564 579 MobiDBLite consensus disorder prediction 477 510 - -
Sto5g1564 579 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 560 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1564 Sto-Chr5 10899838 10903022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1564 - - gmx:100780972 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1564 5 10899838 10903022 Sto5g1564 5 10899838 10903022 CCT
Sto5g1564 5 10899838 10903022 Sto5g1564 5 10899838 10903022 ECH