Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1558 ATGGTTCCTCTAGGTTGGATATATGGCGTGGTAGGTCTGATTGCTGCTACTGCTATATCACTGTATGCAAATGCTCTCATAGCCAAGCTCCATGAATTTGGAGGAAAGAGGCATATTCGATACAGGGATCTTGCtggatatatatatgGTAGGAAAGCTTATTCTCTCACGTGGGCGCTGCAGTATGTCAATCTTTTCATGATAAACACTGGCTATATCATTTTGGCTGGTTCAGCACTGAAGGCTGTCTATGTTCTATTTAGGGATGATCATCAGATGAAGCTTCCGTATTTTATTGCCATAGCAGGATTTGTGTGTGCAATGTTTGCCGTATGCATTCCCCATCTTTCAGCTCTTCGAGTTTGGCTAGGATTTTCAACAGTCTTCagctttatatatattgttacaGCATTTTCACTGTCGCTTAAAGATGGTATGAAATCACCAGCTCGAGATTATAGCATTCCCGGGTCAACAACAAGTAAAATATTTACAACAATTGGAGCGTCTGCTAATCTTGTGTTTGCATTTAATACAGGAATGCTTCCCGAGATACAGGCTACGATCAGACAGCCCGTTGTCAAGAACATGATGAAAGCCCTGTATTTTCAGTTTACCGTTGGAGTTGTACCTCTCTACTTGATTACTTTTACAGGGTACTGGGCTTATGGATCGTCCACCCAAGCCTACTTGATGAATAACGTCAATGGTCCAGTATGGTTGAAAGCCACAGCCAACATTGCAGCCTTTTTACAGTCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTACGAgtatttggatacaaaatatgggGTCACTGGAAACGCACTGGCTATTAAGAACTTGTCATTTCGAGTTTTGGTAAGGGGTGGATATCTGGCTTTCAATACATTTGTATCAGCTCTCCTCCCATTCCTTGGTGATTTCATGAGCCTCACAGGAGCTATAAGCACATTTCCTCTGACATTTATACTGGCAAACCATATGTATCTGGTGGCAAAGAAGAACAAGCTAACGTCTATGCAAAAGCTCTGGCATTGGCTCAACGTTTGTTTCTTTGGAGTAATGTCTGTAGCATCAGCAATTGCAGCCCTACGGCTCATTGCAGTTGATTCCAAAACGTACCATCTATTTGCTGATTTATGA 1152 0.4036 MVPLGWIYGVVGLIAATAISLYANALIAKLHEFGGKRHIRYRDLAGYIYGRKAYSLTWALQYVNLFMINTGYIILAGSALKAVYVLFRDDHQMKLPYFIAIAGFVCAMFAVCIPHLSALRVWLGFSTVFSFIYIVTAFSLSLKDGMKSPARDYSIPGSTTSKIFTTIGASANLVFAFNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVVPLYLITFTGYWAYGSSTQAYLMNNVNGPVWLKATANIAAFLQSVIALHIFASPMYEYLDTKYGVTGNALAIKNLSFRVLVRGGYLAFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVAKKNKLTSMQKLWHWLNVCFFGVMSVASAIAALRLIAVDSKTYHLFADL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1558 383 PANTHER PROLINE TRANSPORTER 1 1 378 - -
Sto5g1558 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 378 - -
Sto5g1558 383 Pfam Transmembrane amino acid transporter protein 1 367 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1558 Sto-Chr5 10824275 10826954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1558 1 383 Organic Solute Cotransporters AT2G39890 77.807 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1558 - - jre:108991915 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1558 5 10824275 10826954 Sto5g1558 5 10824275 10826954 CCT
Sto5g1558 5 10824275 10826954 Sto5g1558 5 10824275 10826954 ECH