Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1555 ATGCCTCCGATTGCGATCATGGCTTCAGCAACCCTCCCTACTCTTGCTGGCATATGTGTGAGGGTGGCGCCATCTTCCAGGCTGAAACCACTTCAATGTCTGCGTTTCACTTCACCGGCATCCGAAGCAGCACCTATgcctatttctctttctcctcATTCCCCAATTCTAAAGGACTCCGATCCCAAGATGAAGGGTCAAAGCCGTCTATTCACATTCGGGCTCGTCGCTTCCTGGTACTCCTCCAACATTGGGGTCCTCTTGCTCAACAAGTACTTGCTCAGCAACTACGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACGGCTTGCTCCTTGCTCAGCTACGTCGCTATAGCTTGGATGAAGGTGGTTCCTATGCAGACCATTCGATCCCGCGTTCAATTCTTCAAGATCTCCGCTCTCAGCCTCATCTTCTGCATCTCCGTTGTGTTTGGCAATATTTCGCTTAGGTACTTGCCTGTCTCCTTCAACCAGGCTGTTGGGGCAACGACGCCGTTTTTCACTGCCGTTTTTGCTTACCTTATGACTTTCAAGAGGGAGGCTTGGCTCACTTATCTCACTCTTGTTCCTGTTGTTACTGGGGTCATCATTGCTAGCGGGGGTGAACCAAGTTTCCATTTGTTTGGGTTCATAATTTGTGTTGCAGCCACAGCTGCAAGGGCTCTAAAATCAGTTTTACAAGGAATTTTGCTTTCTTCTGAAGGGGAGAAGTTGAACTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCGGCCACTCTTATAATGGAAGAAAATGTGGTTGGTATCACATTAGCTCTTGCTAGAGATGATGTCAAGATCATCTGGTATCTGCTATTTAATTCTGCACTGGCGTATTTTGTCAATCTGACCAATTTTTTGGTCACAAAGCATACCAGTGCTCTTACCCTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTAGTGGTTTCAATTCTAATATTTAGAAACCCAGTCTCAGTCACCGGAATGCTAGGTTACTCGCTCACAGTCTTTGGAGTTATACTTTACAGTGAAGCGAAGAAGCGAAGCAAGTGA 1110 0.4613 MPPIAIMASATLPTLAGICVRVAPSSRLKPLQCLRFTSPASEAAPMPISLSPHSPILKDSDPKMKGQSRLFTFGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKVVPMQTIRSRVQFFKISALSLIFCISVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVFGVILYSEAKKRSK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1555 369 Pfam Triose-phosphate Transporter family 75 362 IPR004853 -
Sto5g1555 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 260 363 - -
Sto5g1555 369 PANTHER SOLUTE CARRIER FAMILY 35 62 368 - -
Sto5g1555 369 PANTHER - 62 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1555 Sto-Chr5 10805457 10812615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1555 63 369 Organic Solute Cotransporters AT3G11320 91.205 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1555 - - jre:109019861 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1555 5 10805457 10812615 Sto5g1555 5 10805457 10812615 CCT
Sto1g2319 1 31099841 31102073 Sto5g1555 5 10805457 10812615 ECH
Sto9g2108 9 24931564 24934509 Sto5g1555 5 10805457 10812615 ECH
Sto5g1555 5 10805457 10812615 Sto5g1555 5 10805457 10812615 ECH