Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1552 ATGTCTACTTCAACTTCAAAAGCCCACTGGACACCTGCCaaccacaaaatatttattgatttatgtctTGAAGAGATATTGAAGGGGAATAAGCCTGGGTCTCATTTCACCAAGGAGGGTTGGAGGAATCTCATTGGGTCCTTTTATGCCAAGACTGGTATAAGACATGACAGGAAACAAATAAAGAATCATTGGGATGCAACCAGAAAACAATGGAGGTTATGGGTTAAGTTGATTGGTGATAGTAGTATGAAATGGGATCCCAAAACCAATAATTTTGGGGCCACTGAAGAAGACTGGCATAATTATATAAAGGAAAACCCAGAAGCTGCACAGTTTCAGTTTAAGGAAATCCAGTTCCCTGACAAATTGAGTATCATCTTTGACGAAGGAACACAGACTGGGGAAATGACAGCTTCAACTAGGCTTAAGAGGGAGAATGATGATTTGGCCACCTATCCTCTGCATGGAAAAGTGCGAGAGAAGAAACTCAAGAATCTAGCTGAGGATAATGAATTAAAGAGTTCTATTCCGATTCATGCTATGCCAATCAATACGATTGCAAGTGAGCAAAGCATGTCTAGTTCATCACATCATAAGGTTAAAGCCACTTGGACCCCTCCATTGCACAAGATATTTATTGATCTATGTCTACAAGAAACGTTAAAGGGCAACAAACCCAGTACACATTTTACAAGGGAAGGTTGGAAAAATATCGTTGAGTCATTTCATTCAAAGTCTGGTTTGAATTTAGAGAGATTACAACTTAAGAATCATTGGGATGCAACCAAAGAGCAATGGAAAATTTGGTCTAAACTTGTAGGCACTAGTCATATGAAATGGAATCAATCTAAGCAGAGATTTGATGCTGATGAAGAAGATTGGGCCAACTATATAGAGGCAAATCCAGATGCAGCACAATTCCGCTTTAAGGAATTACAATTTGCTGACAAATTAGAAACCATCTTTAATGGAGCTACTATTACAGGAGAGACTGAAGCCCCAGTCCAGCATAGCATCAACTCTTTGCATGCAAAAGAACATGATACAGCAAAGCCAGATGAGAAAACTGATTGCCTTTGTGATGCTGTTGAGTCAAGAAATGGTGTGATTATTCAAAAGAATGCAACAGAAATTCCTGCAATAGAAGGCAAACTTAGTTATAGTATCGGCGAATGCATTGAATGTCTTGATAGAATGGAGGAAATAGAGCAAGGAAGTGAACTCTACTTGTTTGCTCTAGATGTATTCCTTAAGCAGGAATATAGGGAAATTTTTCTACAGTTGAAAAAGCCTAATCTAAGGATCTCATGGTTGCAGCGGCTTCAGTCTGTTGGTACACCTTTACTTTAA 1353 0.3836 MSTSTSKAHWTPANHKIFIDLCLEEILKGNKPGSHFTKEGWRNLIGSFYAKTGIRHDRKQIKNHWDATRKQWRLWVKLIGDSSMKWDPKTNNFGATEEDWHNYIKENPEAAQFQFKEIQFPDKLSIIFDEGTQTGEMTASTRLKRENDDLATYPLHGKVREKKLKNLAEDNELKSSIPIHAMPINTIASEQSMSSSSHHKVKATWTPPLHKIFIDLCLQETLKGNKPSTHFTREGWKNIVESFHSKSGLNLERLQLKNHWDATKEQWKIWSKLVGTSHMKWNQSKQRFDADEEDWANYIEANPDAAQFRFKELQFADKLETIFNGATITGETEAPVQHSINSLHAKEHDTAKPDEKTDCLCDAVESRNGVIIQKNATEIPAIEGKLSYSIGECIECLDRMEEIEQGSELYLFALDVFLKQEYREIFLQLKKPNLRISWLQRLQSVGTPLL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1552 450 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 357 447 IPR045026 -
Sto5g1552 450 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 157 346 IPR045026 -
Sto5g1552 450 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 3 144 IPR045026 -
Sto5g1552 450 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Sto5g1552 450 Pfam Myb/SANT-like DNA-binding domain 204 298 IPR024752 -
Sto5g1552 450 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 357 447 - -
Sto5g1552 450 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 3 144 - -
Sto5g1552 450 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 157 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1552 Sto-Chr5 10790662 10792211 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1552 - - gmx:100793529 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1552 5 10790662 10792211 Sto5g1552 5 10790662 10792211 ECH