Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1521 ATGGGGAGGTTGTTTTTGGTCAATCTCGAGGGGAAGATCTATAGCTGCAAGCACTGCCGGACCCATCTTGCTCTTTGTGAAGACATCGTATCCAAGAACTGGAGAGCTATTCCTTCTAAGTCTGGTCTGATCATGTTTATCCCAGTTGCTATGTGGCTACTCAATGTACAATGGTTAGAACGTGTCTATGCTACTTTAGAAGCTCAGGAATGCTTATTGCTTCCTGAATCAAGTTTTCCAGGTTTCTTCCCCCCCAACACCTTTTGTACTCTGGAATTGAGATCTTTCCACTGCAGACATGGGAAAGCTTACCTCTTCAGTAAGGTAGTGAACGTTTCTGTTGGAGAAATAGAAGAGAGAATGATGATGACTGGGTTGCATACTGTGGCTGACATTTTCTGTGTGGGTTGTGGATCAATTGTGGGGTGGAAATATGAGACTGCCTATGAAAAAAGCCAGAAGTACAAGGAAGGAAAGTCTGTGCTTGAACGGTACAAGGTGTCTGGTCCTGATGGAAGCAATTACTGGGTCAGTCATGAAGCACATGTTGGTGGAAGTGATGCAGATGATGCTTAA 576 0.4427 MGRLFLVNLEGKIYSCKHCRTHLALCEDIVSKNWRAIPSKSGLIMFIPVAMWLLNVQWLERVYATLEAQECLLLPESSFPGFFPPNTFCTLELRSFHCRHGKAYLFSKVVNVSVGEIEERMMMTGLHTVADIFCVGCGSIVGWKYETAYEKSQKYKEGKSVLERYKVSGPDGSNYWVSHEAHVGGSDADDA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1521 191 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 168 IPR004910 -
Sto5g1521 191 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 41 IPR039058 -
Sto5g1521 191 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 93 191 IPR039058 -
Sto5g1521 191 ProSiteProfiles Yippee domain profile. 73 171 IPR034751 -
Sto5g1521 191 PANTHER PROTEIN YIPPEE-LIKE 1 41 - -
Sto5g1521 191 PANTHER PROTEIN YIPPEE-LIKE 93 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1521 Sto-Chr5 10564725 10567134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1521 - - pvy:116111775 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1521 5 10564725 10567134 Sto5g1521 5 10564725 10567134 CCT
Sto5g1521 5 10564725 10567134 Sto5g1521 5 10564725 10567134 ECH