Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1486 ATGGAAAACTCCGAAGAAGAAATACAAGTTCCCTTCCCTCCAAACCCTAACAATGGCCAGGAGACGGAGGAGTCTTCCAATGGCAGCGATGAGGAAGACGACTACGACGATGTCGAGGATGATGAAGACGATGGTGATGAACTAGAGGAACTTCCTGCCCGAGTTCATGATGTGGTCATCAAGGGGAATACGATAACCAAAGATTGGGTGATTGAGGGCGAGGTGGAAGGATTAAGGAATGCCTCAACTATGCGGGAGCTTATAGAAGCGGCAAAAATTGCCAATGCGAATCTTCATGATCTCCAAATTTTTGATTCGGTTAATATTAGTCTCGAGCCAGGGCCGCCAGAGTTGGTTGGTACTGCTAATGTCATCATTGAGGTCTCTGAGGCCGAGAGCAAACTTTCTGGTGAATTGGGCGCATATACAAAACCCTCGGTTAATTCTTGGACTCTTGAAGGTGCTCTAAAGCTCAAAAACTTGTTTGGTTATGGTGATCTATGGGATTGTTCTTTGGCATTCGGTGTCAATCAAACATCAGATGTCAGTGTTGGGGTGTTTGTGCCTCGACTTAAAGGATTACTAAATCCTGTTGTGGCACGAGTATTCTTGCATTCCCAAGATTGGCATGAGTATTCTTCATACAAAGAGCGACTGTCCGGCATTTCTCTTGGCTTATTCTCAACAAAGCACCATGACTTAGCATACAATCTTGGATGGCGTATCATGACAGATTCATCACAAATGTCATCTAAGTCTATAAGGAGGCAGCTTGGACATAGTTTATTGTCATCTTTGAAGTATACATTTAAGATTGACCAGAGGAACTCGCCAACTAGGCCTACAAAAGGATATGCTTTTCTTTCTACCACACAATTAGGTGGCCTTGCACCAGATCACCGGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGTTATGCTGTCCCTTTTGGTTTTTATAATGCAGCACTGAACCTTGGGATTTCTGCTGGCGTCATTTTTCCATGGGGTCATGGGTTCTTGAACAAGCCTTCTCCCCTGCCAGAAAGGTTCTTTTTGGGTGGTGATTTATCTCCAGTTTGCACCCTAGGAGGGCCATCAACATTATGGGGATTTAGGACAAGGACATTAGGCCCTACTGAACCACGAAGGCAAATTAGGGGTGGAACTGATAATGACAATGCTGATTCCTCTGGAAGGGACTTCATTGGAGGAGACCTTGCTGTTTCTGCTTTGGCAGACCTGTCTTTTGATCTTCCAATTAGCTGGCTAAGAGAACATGGAATTCATGGGCATATTTTTGCTGGCGTTGGGAATATTGCCAAGTTAACTGAGAATGAGTTCAGACATTTTTCCCCTAAAAACTTTATGGAATCATTTCGGACATCTGTTGGATGCGGAATTGTTATTCCTACTAAAGTGTTCCGTCTTGAGGCTAACTACTACTACATACTTAGGCAGCATGAGCATGACCGTGGAAAGACTGGATTTAGGTTCAGCTTCTCAGCTCCTTCGTAG 1521 0.4444 MENSEEEIQVPFPPNPNNGQETEESSNGSDEEDDYDDVEDDEDDGDELEELPARVHDVVIKGNTITKDWVIEGEVEGLRNASTMRELIEAAKIANANLHDLQIFDSVNISLEPGPPELVGTANVIIEVSEAESKLSGELGAYTKPSVNSWTLEGALKLKNLFGYGDLWDCSLAFGVNQTSDVSVGVFVPRLKGLLNPVVARVFLHSQDWHEYSSYKERLSGISLGLFSTKHHDLAYNLGWRIMTDSSQMSSKSIRRQLGHSLLSSLKYTFKIDQRNSPTRPTKGYAFLSTTQLGGLAPDHRSLRFLRQEFDVRYAVPFGFYNAALNLGISAGVIFPWGHGFLNKPSPLPERFFLGGDLSPVCTLGGPSTLWGFRTRTLGPTEPRRQIRGGTDNDNADSSGRDFIGGDLAVSALADLSFDLPISWLREHGIHGHIFAGVGNIAKLTENEFRHFSPKNFMESFRTSVGCGIVIPTKVFRLEANYYYILRQHEHDRGKTGFRFSFSAPS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1486 506 MobiDBLite consensus disorder prediction 25 48 - -
Sto5g1486 506 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 51 504 IPR039910 -
Sto5g1486 506 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 51 504 - -
Sto5g1486 506 Pfam Omp85 superfamily domain 160 503 IPR000184 GO:0019867
Sto5g1486 506 MobiDBLite consensus disorder prediction 379 399 - -
Sto5g1486 506 Pfam Surface antigen variable number repeat 54 130 IPR010827 GO:0019867
Sto5g1486 506 MobiDBLite consensus disorder prediction 1 54 - -
Sto5g1486 506 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 145 504 - -
Sto5g1486 506 Gene3D membrane protein fhac 52 131 - -
Sto5g1486 506 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1486 Sto-Chr5 10224369 10230286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1486 K07277 - gmx:100802876 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1486 5 10224369 10230286 Sto5g1486 5 10224369 10230286 CCT
Sto5g1486 5 10224369 10230286 Sto5g1486 5 10224369 10230286 ECH