Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1477 atgAAGGCATTGAAAGAAATGCAACAACCTCGCTCAATGAGGTTGGGGATATGGCAGAAGGCGGTGCCGTTTGCGGTGGGGAGAAGCGAGGAAGGGTGCGACGTTTTCGACGGAAAGTGGGTTCGGGCGGCGGCAAAGCCACTGTATGAGGAATGGGAGTGTCCGTACATACAGCCACAGCTGACGTGTCAGCAGCACGGACGCCCCGAGAAGGACTACCAATTCTGGAGATGGCGCCCACATGGCTGCGACCTTCCCGAATTCAATGGGAGTATGATGCTTGAAGCACTTCGGGGAAAAAGGATGATGTTTGTTGGAGACTCACTGAACCGGGGTCAGTATGTTTCTTTGGTGTGCCTTCTCCAGAAACTCATTCCTCAACATGCCAAATCCATGCAAACCTTTGATTCCCTCACTGTTTTCACTGCCAAGGCTAGCCCGCTTAGTCTTCGGGCCATTAAAGCCGATGCAAAACAGACAGTTCGTTTCAACACAACTATTCATAGGCTTGGATCTTTTAATGACAAAGTAAAAGAGATTGTGCATCTCTCAACAGAGGATGCCTACCGTATGGCTATGAAAAGTTTGGTTAGATGGGTGAACCTAAACATTGATCCTCACAAGACCAGAGTCTTCTTCACCAGCATGTCTCCTTCTCATACAAAGAGCATAGAGTGGGGAGGCAAATCAGATGGGAACTGCTACAACGAAACAAGCCCGATCGAAGATCCCACATATTGGGGCTCGGATTCACAGAAAAGCATAATGAAAGTGATAGAACAAGTGTTCAGAAAATCCAAAGTGGCGATCACATTTCTGAATATCACACAGCTCTCGAGTTATCGGAAGGATGCACACACTTCGATCTACAAGAAGCAATGGAACCCACTCACACCTCAGCAGTTAGCAAACCCAGCAAGCTATGCTGATTGTGTGCATTGGTGTTTGCCTGGCCTTCAAGACACTTGGAATGAGCTTCTCTTCGCCAAACTATTTTATCCTTGa 1005 0.4766 MKALKEMQQPRSMRLGIWQKAVPFAVGRSEEGCDVFDGKWVRAAAKPLYEEWECPYIQPQLTCQQHGRPEKDYQFWRWRPHGCDLPEFNGSMMLEALRGKRMMFVGDSLNRGQYVSLVCLLQKLIPQHAKSMQTFDSLTVFTAKASPLSLRAIKADAKQTVRFNTTIHRLGSFNDKVKEIVHLSTEDAYRMAMKSLVRWVNLNIDPHKTRVFFTSMSPSHTKSIEWGGKSDGNCYNETSPIEDPTYWGSDSQKSIMKVIEQVFRKSKVAITFLNITQLSSYRKDAHTSIYKKQWNPLTPQQLANPASYADCVHWCLPGLQDTWNELLFAKLFYP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1477 334 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 22 144 - -
Sto5g1477 334 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 171 334 - -
Sto5g1477 334 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 173 329 IPR026057 GO:0016740
Sto5g1477 334 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 85 149 IPR026057 GO:0016740
Sto5g1477 334 Pfam PMR5 N terminal Domain 32 84 IPR025846 -
Sto5g1477 334 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 171 334 IPR029962 GO:0016413
Sto5g1477 334 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 22 144 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1477 Sto-Chr5 10154204 10158672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1477 - - rcu:8272095 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1477 5 10154204 10158672 Sto5g1477 5 10154204 10158672 CCT
Sto5g1477 5 10154204 10158672 Sto5g1477 5 10154204 10158672 ECH