Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1470 ATGGCTGAAGGCTTTAGCTTCCCTAATGTATACCTGTGGATTCACAACCTCCCTCCCATCTCAGAATGGAGCAACAAAAGTTGCATGACCTTGTGTCTATGTAATTCCTCAACCTCCTCCCAACCCACTCTCAATCTCACCAtctccaaaacccaccaatccCCACCAAAGCTCTCTCTTGCCATTGTAGCCGACTTCAACATCCCCGTCTCTCTCTGGGCCTCCAAGCCCATCAAGCCCAACTCCGAATCCATACCCATCTCCAATCTTCTCATCAGCTTCATCGAAGCCATACTCCACTACGGCTCCAGCAGAAACACCCCCTGCATCAAATTCCCCAAGCTCGACTCCATCTCCAACCTCTCCGACATCTTCAACCACGCGTTCCTCACCCTCGTCTTCCTCGTTTGCATCTACGAATCCCCCACGGATCTTCGCTCCGGATGTATTGCTCCCATCAAGGACCACCTGGCGGGCCCTGATTCCAGACAGGCTTCGAGGCTCCTGATGAAGTTGTTGGGGTCGAATTTGGAAGAGCAGTGGATGCGGTCGGTTCAGTTGTATTGTCCTGTTATAGTGATGGATGTGGAGAATTCTAACTCCCATTCTGTTTCTGATGAGAGGCTTCGGTTCTCTCTGAGATATCACCAGCTTGAAGGTGTTGTTCAGTTCAATTATAAGGTTGTTATACAGGAGAAGTGGGTTGATATCATGGTTAGCATTGACAACATCAGGTGTGACATAGTGAAACTCGTGAACGACACTCTTCTGAGAAGACGAGGATCGGGCGCATCAGAGAAACATTTCCCTTCAAGAATAAGCCTCCAACTCACCCCCACACTCCAATACCAAGTGATGAGCGTCTCGGTGGGGAAATCATCGGAGAACCCACTCCGAGAGATCGGGAGAGACAAAGGCATAGAAGCATCGTTCGAGCCACCCAATCCCTTGGGGCTGAAGCTATCGGCGGGAGAGACCCAAACGGTGAGCATCAAGCCATGGAAGTTCGAAGAGTCCGTGTACGGCTATAGCGCCAACCTCAACTGGTTCCTTCACGACAGCATCAACGGGAAGGAAGTGTTCTCGTCCAAGCCTTCCAAGTGTGCGCTGATGAACCCGAGGTCGTGGTTCAGGGATAGGTACTCCAGTGCTTCTAGGCCTTTTACGAGACAAGGGGGAGTCGTATTTGCTGGTGACGAATACGGAGAGAGCGTGTGGTGGAAGGTGGATAAAGGGGCTTTGGGGAAAACTATGGAGTGGGAGATAAGGGGTTGGATTTGGTTGACGTATTGGCCTAACAAGTATACAACTTTCTATAATGAGACTCGCAGGTGCGAGTTCACAGAAACCGTTTCTCTCAATGTAATGCCTTGA 1374 0.4964 MAEGFSFPNVYLWIHNLPPISEWSNKSCMTLCLCNSSTSSQPTLNLTISKTHQSPPKLSLAIVADFNIPVSLWASKPIKPNSESIPISNLLISFIEAILHYGSSRNTPCIKFPKLDSISNLSDIFNHAFLTLVFLVCIYESPTDLRSGCIAPIKDHLAGPDSRQASRLLMKLLGSNLEEQWMRSVQLYCPVIVMDVENSNSHSVSDERLRFSLRYHQLEGVVQFNYKVVIQEKWVDIMVSIDNIRCDIVKLVNDTLLRRRGSGASEKHFPSRISLQLTPTLQYQVMSVSVGKSSENPLREIGRDKGIEASFEPPNPLGLKLSAGETQTVSIKPWKFEESVYGYSANLNWFLHDSINGKEVFSSKPSKCALMNPRSWFRDRYSSASRPFTRQGGVVFAGDEYGESVWWKVDKGALGKTMEWEIRGWIWLTYWPNKYTTFYNETRRCEFTETVSLNVMP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1470 457 PANTHER NEURONAL PAS DOMAIN PROTEIN 185 455 - -
Sto5g1470 457 PANTHER NEURONAL PAS DOMAIN PROTEIN 6 187 - -
Sto5g1470 457 PANTHER EXPRESSED PROTEIN 185 455 - -
Sto5g1470 457 PANTHER EXPRESSED PROTEIN 6 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1470 Sto-Chr5 10083698 10086367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1470 - - gmx:100782905 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1470 5 10083698 10086367 Sto5g1470 5 10083698 10086367 CCT
Sto5g1470 5 10083698 10086367 Sto5g1470 5 10083698 10086367 ECH