Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1465 ATGGTTTCAGTTGATAATAGTAATTTCAAAGACGAAATCGAGGAAACAAGTGATAGTGAAGTCAAGGATTTAGCTGCAATTGAAATTTCTACATCTCCAAGGACCATTATGAGTAGAGAAAATCCTGAGAGAAACTTCCAAGAAACCTTGAACTCTTTTCCCAAAAGGATTAATTTCCTCAAATGTAGTTCTGCATTTGCCAAATCCACTAGTGAAAGAAACCATATTTCACAACCTgtgccttcttcttcttctgcttctcaTCGAATCAGAAAACGCTTAAGTGGCATGATTTCTCAAAAAGTTGACTGGGTTTCACTCAACAAGATGTGCAAAGAATGGTTTAGAAACCCAATGAACATGGCCCTTTTCGCGTGGATCACCTGCGTCGCTGTTTCAGGTGCAATTCTCTTCCTTGTTATGACTGGAATGTTGAACAACGTGCTTCCAAAGAAGTCTCAGAGACACACATGGTTTGAAATCAACAATCAAATACTCAATGCACTGTTTACCCTTATGTGTTTGTATCAACACCCGAAAAGAATCCACCACCTCGTGCTTCTATGCAGATGGAAACCAAATGATATCTCAATACTTAGGAAGGTCTACTGCAAGAATGGGACTTGCAAACCCCATGAAAGGGCACACATGATGGTAGTGGTCATTCTTCTTCATGTGAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAATTTAGGGTACAAAAGATCAGAGAGACCTGCCATAGGAGTTGGAATATGTATTTCTGTTGCAATAGCTGCACCTGCAATTGCTGGTCTTTATGCCATTCTCAGCCCGATTGGAAGGGACTACGAGTTCGAGATAGACGAAGAAGCACAGGCTGAAATCACTGCTTCTCAAATAATGCCATTGGAGAAAAAGTATTCATTTGCAAGAAGCAATGAACACGTGAGGGAATTTGAGAATATGCCACAATGGAGAGGAGGAATACTTGACATTTGGGAGGACATTTCTATGGCATATCTCTCACTTTTCTGCAGTTTTTGTGTTTTTGGGAGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTTCACATTGCTACTTTTATCCTCTTCTGTACAGCTCCATTCTGGATTTTTATCTTAGCTGCTGTTAATATCGAAGATGACAATGTTAGACAAGCTCTAGTAGTTATTGGAATTCTCCTATGTGCTTTTGGTTTGCTATATGGAGGCTTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTGCCTTCTTACACCTTCTGTTTTGGTAAACCCTCCATTTCTGACTGCACACTTTGGCTTTGCTGTTGCTGGTGCTCTCTTGCTCAGGAGGCTCGGACCGGGAATTCCTACGATGTCGTAGAAGATAAATTTTGCAGGAAACAAGCAATTTCACCACCATTGCCTCATGAAGATGAAGCATTGACCAGAACATCTAGATGTTTAAGTTCAGATATGCCACTATCTGCTGTAAAAGAAAAGTCTTTTGATCAAAGTGGTGAAGTAACATTGAGCCCACCAACTCTAGCATTGAAAGCAAAGCTTGTGGGACACGTCTTTATCCTCATCTGCTTCTTCAACTCTTCATTGGAACTGGATGGTGACATTCATAATATGTTCCACAAGAGAATCGGATAG 1650 0.3976 MVSVDNSNFKDEIEETSDSEVKDLAAIEISTSPRTIMSRENPERNFQETLNSFPKRINFLKCSSAFAKSTSERNHISQPVPSSSSASHRIRKRLSGMISQKVDWVSLNKMCKEWFRNPMNMALFAWITCVAVSGAILFLVMTGMLNNVLPKKSQRHTWFEINNQILNALFTLMCLYQHPKRIHHLVLLCRWKPNDISILRKVYCKNGTCKPHERAHMMVVVILLHVNCFAQYALCGLNLGYKRSERPAIGVGICISVAIAAPAIAGLYAILSPIGRDYEFEIDEEAQAEITASQIMPLEKKYSFARSNEHVREFENMPQWRGGILDIWEDISMAYLSLFCSFCVFGRNMERLGFGNMYVHIATFILFCTAPFWIFILAAVNIEDDNVRQALVVIGILLCAFGLLYGGFWRIQMRKRFNLPSYTFCFGKPSISDCTLWLCCCWCSLAQEARTGNSYDVVEDKFCRKQAISPPLPHEDEALTRTSRCLSSDMPLSAVKEKSFDQSGEVTLSPPTLALKAKLVGHVFILICFFNSSLELDGDIHNMFHKRIG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1465 549 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 319 451 IPR006461 -
Sto5g1465 549 Pfam PLAC8 family 320 450 IPR006461 -
Sto5g1465 549 PANTHER - 15 491 - -
Sto5g1465 549 PANTHER PLAC8 FAMILY PROTEIN-RELATED 15 491 - -
Sto5g1465 549 Pfam Protein of unknown function (DUF2985) 113 191 IPR021369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1465 Sto-Chr5 10044009 10046216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1465 - - gmx:100795088 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1465 5 10044009 10046216 Sto5g1465 5 10044009 10046216 CCT
Sto9g2594 9 28379302 28380951 Sto5g1465 5 10044009 10046216 ECH
Sto5g1465 5 10044009 10046216 Sto5g1465 5 10044009 10046216 ECH