Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1464 ATGTCGGATCAGATAGCGAGGGCTGAGGATTTCGAGGCGAAAGCGGAGAAGAAGCTTAGTGGATGGGGATTGTTCGGCTCCAAATACGAGGATGCTGCTGATCTCTTTGATAAAGCCGCCAATTCATACAAGCTTGCTAAATCATGGGATAAAGCAGGTTCTACATACATCAAGTTGGCAAATTGTTATTTGAAGGTGGAAAGCAAGCATGAAGCTGCCCAAGCTTATGTTGATGCTGCACATTGCTATAAAAAGACAAATGTGAATGAGGCTGTATCTTGCTTGGACAATGCGATAAATGCTTTCTGTGAAATTGGAAGACTCAGTATGGCTGCTAGATATTTTAAGGAAATTGCTGAGTTGCATGAGTCTGAACAGAATATTGAGCAGGCTATCGTTTACTATGAAAAAGCAGCTGACTTTTACGAAAATGAAGAAGTGCAAACATCTGCAAACCAGTGCAAGCAAAAAGTTGCTCAGTTTGCTGCTCAGCTTGAACAATATCAGAAGTCAGTTGAGATTTATGAAGAGATAGCTCGTCAGTCTCTCAACAATAATTTGTTGAAGTATGGAGTTAAAGGGCATCTCCTTAATGCTGGCATTTGCCAACTCTGTAAAGGCGATGTTGTTGCTATTACCAATGCACTAGAGCGATATCAGGAATTGGATCCAACATTTTCAGGAACTCGTGAGTATAGATTTTTGGCGGATATTGCTGCTGCAATTGATGAAGAAGATGTTGGGAAGTTTACTGATGTTGTCAAGGAATTTGACAGCATGACCCCTCTGGATTCTTGGAAGACAACTCTTCTTTTGAGGGTGAAGGAAAAGCTGAAATCCAAAGAACTTGAGGAGGATGATCTAACCTAA 870 0.4103 MSDQIARAEDFEAKAEKKLSGWGLFGSKYEDAADLFDKAANSYKLAKSWDKAGSTYIKLANCYLKVESKHEAAQAYVDAAHCYKKTNVNEAVSCLDNAINAFCEIGRLSMAARYFKEIAELHESEQNIEQAIVYYEKAADFYENEEVQTSANQCKQKVAQFAAQLEQYQKSVEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERYQELDPTFSGTREYRFLADIAAAIDEEDVGKFTDVVKEFDSMTPLDSWKTTLLLRVKEKLKSKELEEDDLT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1464 289 CDD SNAP 7 278 IPR000744 GO:0006886
Sto5g1464 289 SMART tpr_5 53 86 IPR019734 GO:0005515
Sto5g1464 289 SMART tpr_5 112 145 IPR019734 GO:0005515
Sto5g1464 289 SUPERFAMILY TPR-like 7 281 IPR011990 GO:0005515
Sto5g1464 289 PANTHER ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 1 289 - -
Sto5g1464 289 Coils Coil 151 185 - -
Sto5g1464 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Sto5g1464 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Sto5g1464 289 PRINTS NSF attachment protein signature 119 136 IPR000744 GO:0006886
Sto5g1464 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Sto5g1464 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Sto5g1464 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Sto5g1464 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
Sto5g1464 289 Gene3D Tetratricopeptide repeat domain 5 288 IPR011990 GO:0005515
Sto5g1464 289 Pfam Soluble NSF attachment protein, SNAP 7 278 - -
Sto5g1464 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 289 IPR000744 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1464 Sto-Chr5 10037892 10041984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1464 K15296 - jre:109004758 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1464 5 10037892 10041984 Sto5g1464 5 10037892 10041984 CCT
Sto9g2595 9 28383609 28387094 Sto5g1464 5 10037892 10041984 ECH
Sto5g1464 5 10037892 10041984 Sto5g1464 5 10037892 10041984 ECH