Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1459 ATGTCCATTCATTCCTGGATTTCAGAGCACAAGCTCGCTAGccttgGGGCCGTTTGGGCGTCGGGAATAGGAGCATCCCTTGTGGCTAATTCACGCACAACTTCTCCTATGAAGCCCAGCCTTAGGCTTATCCATGCCAGGATGCACGCGCAGGCATTAACTCTGGCTGTGCTCTCTGCTGCTGCGGCATATCAATACTATCACACTCCAACTTCTGCTCCTCAACAACCAAAATCACAGGCCCAAACTAATATCAAAGACCTCCTTGAATGGGACATCATCACTTCTTCTCCTTTCTAA 300 0.4833 MSIHSWISEHKLASLGAVWASGIGASLVANSRTTSPMKPSLRLIHARMHAQALTLAVLSAAAAYQYYHTPTSAPQQPKSQAQTNIKDLLEWDIITSSPF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1459 99 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 79 IPR040153 -
Sto5g1459 99 Pfam Hypoxia induced protein conserved region 9 60 IPR007667 -
Sto5g1459 99 Gene3D - 12 71 - -
Sto5g1459 99 ProSiteProfiles HIG1 domain profile. 1 76 IPR007667 -
Sto5g1459 99 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1459 Sto-Chr5 10007254 10007647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1459 - - aip:107608949 101.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1459 5 10007254 10007647 Sto5g1459 5 10007254 10007647 CCT
Sto5g1459 5 10007254 10007647 Sto5g1459 5 10007254 10007647 ECH