Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1386 ATGGAGCAAGGTAAGAGTGGAGTGCTGGTAGCGAAGGGTTTGCCTCATCAGTTTCAGAACCCCATAGAGCATCTCCAAGCACGCTTCAAGGACTTGGAGAATGGCTTCCGGCTTTGGCTCGCCAAGCAATCTCTCCCCGTTGAGGCCGCCGTCGTCACCACCACCAGCGCCGCCCAGGGGGCTGCCATCGGTGTCTTTATGGGTACCCTTTCTCCCGATGCTTCCTCAGCTTTTCCCACTCCGCCTCAGGCTTCCCTCAACCCTCAAGCCATGGCTTCCTTGAAGCAAGCTCAGGCTCTTTCTGGGGGGCCCTTGGTACAAGCCCGCAACTTCGCTGTCATGACAGGAGTTAATGCTGGTATTGCCTGTGTCTTGAAAAGAATAAGGGGCAAGGAAGATGTCCAATCCAGCATGGCGGCAGCTTTTGGTTCCGGGGTCATGTTTTCTTTGGTAAGTGGTATGGGTGGACCAAATCAAGCAACAAATGCAGTCACTTCCGGAGTTTTTTTCGCTCTTGTTCAAGGTGGACTTTTCCAGTTAGGACAGAAGTTTTCTCAACCTCCAGCTGAAGATACTCACTATGCTAAAACAAGATACATGTTGCACAACCTTGGCCTCCAGAGCTACGAGAAAAATTTCAAGAAAGGCTTGTTAACTGACAACACTTTGCCTTTACTGACAGACAGTGCTCTCAGAGATGTAAAAATCCCTCCTGGACCAAGGCTTTTAATCCTTGATCACATCCAGAGGAACCCAGGTTTGAGAGAGAAGTAA 774 0.5026 MEQGKSGVLVAKGLPHQFQNPIEHLQARFKDLENGFRLWLAKQSLPVEAAVVTTTSAAQGAAIGVFMGTLSPDASSAFPTPPQASLNPQAMASLKQAQALSGGPLVQARNFAVMTGVNAGIACVLKRIRGKEDVQSSMAAAFGSGVMFSLVSGMGGPNQATNAVTSGVFFALVQGGLFQLGQKFSQPPAEDTHYAKTRYMLHNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVKIPPGPRLLILDHIQRNPGLREK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1386 257 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT HP30-2 8 250 - -
Sto5g1386 257 Pfam SAM domain (Sterile alpha motif) 201 250 IPR001660 GO:0005515
Sto5g1386 257 Gene3D - 198 255 IPR013761 -
Sto5g1386 257 CDD SAM_superfamily 200 250 - -
Sto5g1386 257 Pfam Tim17/Tim22/Tim23/Pmp24 family 50 172 - -
Sto5g1386 257 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 8 250 IPR039175 GO:0042721|GO:0045039
Sto5g1386 257 SUPERFAMILY SAM/Pointed domain 197 250 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1386 Sto-Chr5 9488874 9491601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1386 - - gmx:100813121 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1386 5 9488874 9491601 Sto5g1386 5 9488874 9491601 ECH