Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1379 ATGGCTATGGGATTGTTCTATTACGGGTTGCGAGACACTTCGGCTACTTATTCTATCAACTTTCTCAACTTGATTCCCATATTCACGTTCCTTGTTTCAATCATATGCAGGATAGAGAAATTGGGGATAGAAACATGGGCTGGAAAAGCCAAGACATTGGGAACAATTCTGTGTGTTGGAGGAGCCTTAACTACTAGTCTTTACACAGGAAAAGAATTCCACATTGATCACCATACTCATCactcacattctcattctccttCTGGAAAACCACCCGAAACTCACATGCTTCGAGGCACTCTTTTTCTAGTTGCTAGTTGCATGTCTTACACAGCATGGTACATTGTGCAAGTGAAGCTGCTGAAAGTACTTCCATTGAAGTATTGGGCAACGATGCTGTCATGTATGATGGCATCAGTTCAAGCAGCAGGAGCACTTGCTACAGCTGCTACTTTCTGCTTAATCTCATGGGCTATTTCACTGAAAGGACCTACTTATCCTCCAATATTCAATCCCCTAGCTCTTATTTTTGTGGCCTTCTCAGAAGCCATTTTTCTCGGTGAACCACTCCGAGTTGGAACatTGATTGGCATGGTTTTGATCATATCTGGATTATACTCTTTTCTGTGGGGTAAAAGAAAAGAGACACAAACAGGCTTGCCTCAACCAAATGTAGCAGCTGGTGATGTATCTACAGGCATAACTATCGAGTCTACTGGGACGCCGCATTCCGCGAAAGCGATTGTAGACCGTTTTGAGTTTGTTAATCTGTACGAGAAGAGACTGGGTGATGCTGGTTATATTAATTTCAACCTTGGACGCACTAATAACCGTGGGGATGGTCTTCTAATAGCAGTGCTAAAGGAATACTTTAAGATTCTTAATTACAAAGAGTTGCACTTCAATGATTGTGGTGATCGTGTGGCTCAGCTGTTACATGTTGAATTAACATCTCCAGCTTCGCAGCCCAAAAACAATGATACTGGCCAGGAGATTCTTATTGTCAATACACACTTACTTTTTCCTCATGACTCAAGTCTCTGCATAGTACGCCTGCATCAGGCCTACAAGATTCTTCAATATGTGGAAGCTTATCAGAAAGAATATCAACTGAAGCCCCTCCCAATCATGCTATGCGGTGACTGGAATGGAAGCAAACGTGGGAATGTTTACAAGTTCCTGAGGTCTCATGGGTTTGTATCATCATATGACATTGCACATCATTACACAGATGCAGATGCACACAAGTGGATTAGTCATCGTAATCACCGTGGAAACATATGTGCTGTTGATTTTATATGGCTTCTAAATCCTGATAGATATAGGAAACTACTAAGAGCAAGTTGGAGTGAAGCTGTATTTGGCATGTTCAAGGCCGACAATGAAGATTGTATTACCTATTCTGGTTTCTATGATGCTCTTGAACAGCTTAATTTAATTGGTCCTCCTTATGGACTTAGTGTTCAAGAGACGAAGGACTTATGGCTCCTAGTAGATATAGATGGAAATGGTGTTCTTGATTTCAAAGAATTTCAGCAGCATATCTGGATTCCAGCAGATCAgatagatgaaagaaagaatgaagatCTGAATGGTGAATCAAATGGCATTCAAGAACAAAGACTTGGTTTCAGTGTAAAAGATGCAGCTCTGTTCCCCCCTGAAGCAGAGAAAGGCATATGGCCTGATGATTACTCCCTTTCTGATCATGCAAGACTAACAGTGGCTTTCTCACCAATAAGATTGTCATGTTCCAGATGA 1761 0.4049 MAMGLFYYGLRDTSATYSINFLNLIPIFTFLVSIICRIEKLGIETWAGKAKTLGTILCVGGALTTSLYTGKEFHIDHHTHHSHSHSPSGKPPETHMLRGTLFLVASCMSYTAWYIVQVKLLKVLPLKYWATMLSCMMASVQAAGALATAATFCLISWAISLKGPTYPPIFNPLALIFVAFSEAIFLGEPLRVGTLIGMVLIISGLYSFLWGKRKETQTGLPQPNVAAGDVSTGITIESTGTPHSAKAIVDRFEFVNLYEKRLGDAGYINFNLGRTNNRGDGLLIAVLKEYFKILNYKELHFNDCGDRVAQLLHVELTSPASQPKNNDTGQEILIVNTHLLFPHDSSLCIVRLHQAYKILQYVEAYQKEYQLKPLPIMLCGDWNGSKRGNVYKFLRSHGFVSSYDIAHHYTDADAHKWISHRNHRGNICAVDFIWLLNPDRYRKLLRASWSEAVFGMFKADNEDCITYSGFYDALEQLNLIGPPYGLSVQETKDLWLLVDIDGNGVLDFKEFQQHIWIPADQIDERKNEDLNGESNGIQEQRLGFSVKDAALFPPEAEKGIWPDDYSLSDHARLTVAFSPIRLSCSR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1379 586 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 253 584 - -
Sto5g1379 586 SUPERFAMILY DNase I-like 258 405 IPR036691 -
Sto5g1379 586 SUPERFAMILY Multidrug resistance efflux transporter EmrE 133 214 - -
Sto5g1379 586 SUPERFAMILY EF-hand 392 515 IPR011992 -
Sto5g1379 586 ProSiteProfiles EF-hand calcium-binding domain profile. 486 521 IPR002048 GO:0005509
Sto5g1379 586 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 253 584 - -
Sto5g1379 586 ProSitePatterns EF-hand calcium-binding domain. 499 511 IPR018247 -
Sto5g1379 586 Gene3D Endonuclease/exonuclease/phosphatase 249 580 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1379 Sto-Chr5 9435231 9443711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1379 257 585 EF-hand Containing Proteins AT1G02270 54.857 9.59e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1379 - - gmx:100797792 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1379 5 9435231 9443711 Sto5g1379 5 9435231 9443711 ECH