Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1368 ATGGAAACCAAAGTTCTATCCTCTGGAATCCCCCACTCTCACTTGCCGCCAAGTTATGTTCGGCCAGAATCAGAGCGTCCTTGTCTCTCTCAAGTTTCCACCTGCGACGACGTCCCTCTCATCGACTTGTCTTCTCCTCACACTTCTCTCATTCTTACCCAGATTGCTCACGCCTGCAAATCCTATGGCTTTTTCCAggtgattAATCATGGGGTGAGtgtggaggcagtgaagaaaATGACAGAAGTGGCTTATGAGTTCTTCAGCTTGCCCGTGGAGGAGAAGATGAAGCTTTATTCAGATGATCCATCCAAGACTGTGAGATTGTCTACTAGTTTTAATGTGAAGAAGGAGAAGGTTCATAACTGGAGAGACTATCTCAGACTCCATTGTTATCCTCTTCATCACTATCTCCCTCATTGGCCTTCTAACCCTCCATCTTTCAAGGAAACGGTGAGAAATTACTGCACAGAAGTTCGAGAGTTAGGATTGAGAATACAAGAATACATAGCACAGAGCTTGGGCCTTGAAAAAGATTACATAAAGCAGGTATTGGGTGAACAAGGGCAGCACATGGCAGTGAACTACTATCCTCCATGCCCAGAGCCAGAGCTCACCTATGGCTTGCCAGGCCACACTGACCCTAACGCACTCACTATTCTGCTCCAAGACCTCCATGTCTCTGGCCTTCAAGTTCTCAAAGATGGAAAGTGGGTCGCCATTAAGCCCCACCCCAATGCCTTTGTCATCAACATTGGAGATCAAATCCAGGCTCTGAGTAATGGGATTTACAAGAGCGTGTGGCACCGTGCTGTGGTTAACTCTGAGAAGCCAAGGCTTTCTGTGGCTTCATTTCTTTGTCCCCATGACGACGCCTTGATCAGCCCTGCAAAACCACTCACACAAGATGGCTCTGCACCCATGTACAGGAGCTTCACTTATACAGAGTATTATAGCAAGTTTTGGAGCAGAGACTTGGATAAACAACACAGCTGTTTGGAACTTTTCAAGAACGAGTAA 1020 0.4549 METKVLSSGIPHSHLPPSYVRPESERPCLSQVSTCDDVPLIDLSSPHTSLILTQIAHACKSYGFFQVINHGVSVEAVKKMTEVAYEFFSLPVEEKMKLYSDDPSKTVRLSTSFNVKKEKVHNWRDYLRLHCYPLHHYLPHWPSNPPSFKETVRNYCTEVRELGLRIQEYIAQSLGLEKDYIKQVLGEQGQHMAVNYYPPCPEPELTYGLPGHTDPNALTILLQDLHVSGLQVLKDGKWVAIKPHPNAFVINIGDQIQALSNGIYKSVWHRAVVNSEKPRLSVASFLCPHDDALISPAKPLTQDGSAPMYRSFTYTEYYSKFWSRDLDKQHSCLELFKNE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1368 339 Gene3D - 3 319 IPR027443 -
Sto5g1368 339 Pfam 2OG-Fe(II) oxygenase superfamily 190 288 IPR044861 -
Sto5g1368 339 SUPERFAMILY Clavaminate synthase-like 12 327 - -
Sto5g1368 339 MobiDBLite consensus disorder prediction 1 23 - -
Sto5g1368 339 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 143 IPR026992 -
Sto5g1368 339 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 288 IPR005123 -
Sto5g1368 339 PANTHER PROTEIN DOWNY MILDEW RESISTANCE 6 1 337 - -
Sto5g1368 339 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1368 Sto-Chr5 9365504 9368826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1368 13 327 Glycosyltransferase AT5G59530 31.818 4.99e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1368 K24028 - zju:107414987 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2674 9 28860906 28865780 Sto5g1368 5 9365504 9368826 ECH
Sto5g1368 5 9365504 9368826 Sto5g1368 5 9365504 9368826 ECH