Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1363 ATGTCTCAAATCACCATAAAATCTCCAAAGCACTGTGGCAACAAGGAAGGACTCCACATAAAGAGGAACTACAAGAAGCTCTTCTTCGCCCTCTCTTCATGTTTCACCATAATTCTTCTCCTAATCCTCCTCATCTGGTTCATCCTCCGTCCTTCCAACCCTCAATTCTCCCTCAAAGACCTTCAAATCTACCAGCTCAACCTCTCTGCCTCCTCTTCCCTCAACTCCTCCATCCAGCTCACCCTCCTCTCCAGAAACCCAAACCAGAAGGTCGCCATCTATTATGACGACTTCCAAGTCTATGTCACCTACAAGAGCCAGCAGATCACCATGGATGCCTCTCTCCCTCCTTTCTTCCAGAACCATCAAGAGACCAATCTCCTGTCTGCCTCTTTGCTTGGGAATGGCCTCCCTGTGTCCCCTTCTCTTGGGTATGAAATGGGTCGAGACCAATCTGCTGGAAGACTGGTTTTCAATGTTAAGGTTAATGGGAAGCTGAGGTGGAAGGTGGGAACATGGGTGTCTGGTCGTTCCAGGTTTAATGTTAATTGTGTTTCAGTCATTGCTTTTGGTTTTGGTCCTCTGAGTTCAAAGCAGGGGGCTCAGTGTTCTACTGATGTTTAA 624 0.4744 MSQITIKSPKHCGNKEGLHIKRNYKKLFFALSSCFTIILLLILLIWFILRPSNPQFSLKDLQIYQLNLSASSSLNSSIQLTLLSRNPNQKVAIYYDDFQVYVTYKSQQITMDASLPPFFQNHQETNLLSASLLGNGLPVSPSLGYEMGRDQSAGRLVFNVKVNGKLRWKVGTWVSGRSRFNVNCVSVIAFGFGPLSSKQGAQCSTDV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1363 207 PANTHER NDR1/HIN1-LIKE PROTEIN 26 23 206 - -
Sto5g1363 207 Pfam Late embryogenesis abundant protein 81 184 IPR004864 -
Sto5g1363 207 PANTHER OS05G0367900 PROTEIN 23 206 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1363 Sto-Chr5 9315718 9316341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1363 27 184 EF-hand Containing Proteins AT5G21130 22.360 3.59e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1363 - - gmx:100783857 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2677 9 28888090 28888722 Sto5g1363 5 9315718 9316341 ECH
Sto5g1363 5 9315718 9316341 Sto5g1363 5 9315718 9316341 ECH