Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1340 ATGTCTGGCGGTGATCCTTCATTGCCATCTCTCACCAGCCTCACAACCGAGCAAATTCAAAAGTACTTGGAGGAAAATAAGCAGCTGATTCTGGCTATAATGGAGGGTCAGAACCTAGGAAACTCCAGTGATATTGCCCAATGTCAAGCCAGGCTTCAGCATAACTTGACTTTTCTTGCCAAACTTGCTGATACTCAACCTCAAGCACAAATACAATCTCAGCTGCCATCCCAGGCTGTTGTGCAACAAGGGCAAGGCACACAGCATCCTCATATAGCAATGTCTCAGCCACAACCAGATCTTTCTACGTTGCCTTTCAATATGAAAGATCAGAAGCAAGTGCAACATCATCTAACAATGTCTCTGCAACAACCAGATGTTTCAACTTCCAAGTTGCCTGTCCAGATGAATGAGCAGCAGCAAGAGCAACAGCAACCAGCCTTCTTCCAGCAACAGCAACTCATGCAAGGGCAGATGAATTGGTTCCCTGCTGGCTCTAACAGTGGCATTAATCAGGCCTCGCAAGCAAGACTTGGTGTTAATCTCTCTGGTAAGCAAGAAAGCAATCCCACTGGGTTAGAGGTTGGTGGGTCTCTGGGAAAGTCACCACTCAGTCGTAATAGTGGAAATACAAGACCCTGA 642 0.4657 MSGGDPSLPSLTSLTTEQIQKYLEENKQLILAIMEGQNLGNSSDIAQCQARLQHNLTFLAKLADTQPQAQIQSQLPSQAVVQQGQGTQHPHIAMSQPQPDLSTLPFNMKDQKQVQHHLTMSLQQPDVSTSKLPVQMNEQQQEQQQPAFFQQQQLMQGQMNWFPAGSNSGINQASQARLGVNLSGKQESNPTGLEVGGSLGKSPLSRNSGNTRP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1340 213 Pfam SSXT protein (N-terminal region) 14 70 IPR007726 -
Sto5g1340 213 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 6 191 IPR044779 GO:0003713
Sto5g1340 213 PANTHER TRANSCRIPTION FACTOR SSXT FAMILY-RELATED 6 191 - -
Sto5g1340 213 MobiDBLite consensus disorder prediction 163 213 - -
Sto5g1340 213 MobiDBLite consensus disorder prediction 124 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1340 Sto-Chr5 9168799 9171125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1340 - - ccaj:109816259 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1340 5 9168799 9171125 Sto5g1340 5 9168799 9171125 ECH