Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1306 ATGAGAAGAGAGCTAGGAATCAATATAATTGATGAACAGAAGGTGCAACTGTCAAAGGTCAGCAAGAAATGTGAAAAGTGTGGCCATGATGAAGCTAACTTTTATACCAGGCAGATAGCGAGAAGTGAAGTAAAGCAGCTTCCCCATACAGCAATGGCCAACGTTTCAATTCCACTCCCTCGAAACGCCTTGTCCATACGCTTTTCCTCACCCAAACGCCTCCTTTTCTCTCCTTCCACTTCCACCCTCCGCTTCTCCACCACCATTCGCTGCTCTGGTGAATCGGATGCCTCCGAGACTCGGCAAACATCGCTTGCTTTCAACCATATAAAAGGCGTGACCTGTGGTATTCTAGCGGCTTGGACTGTGACTGCTGCCGCTGCATTTCCTGTTATAGCTGCGAACCAGAGGCTTCCTCCATTGTCGACAGAGCCCAACCGCTGTGAGCGTGCCTTCATTGGTAACACAATTGGTCAAGCAAACGGAGTTTATGATAAGCCATTAGATCTTCGGCTTTGCGATTACACTAATGAAAAATCCAACTTAAAGGGGAAGTCTCTATCTGCAGCTCTAATGTCAGATGCCAAGTTTGATGGTGCAGACATGACAGAAGTTGTGATGTCAAAGGCTTACGCTGTTGGTGCTAGCTTCAAAGGTGTGGACTTCTCAAATGCAGTCTTGGACCGTGTTAACTTCGGGAAAGCTGATCTGGAAGGAGCTGTGTTCAAGAACACAGTATTGTCAGGGTCCACCTTTGATGAAGCAAAGTTGGAGAATGCAGTTTTTGAGGACACTATAATAGGTTACATCGATCTACAGAAGCTATGCACAAACAAAAGTATCAGTGATGAAGGAAGAGCTGAGCTGGGATGTAGGTGA 879 0.463 MRRELGINIIDEQKVQLSKVSKKCEKCGHDEANFYTRQIARSEVKQLPHTAMANVSIPLPRNALSIRFSSPKRLLFSPSTSTLRFSTTIRCSGESDASETRQTSLAFNHIKGVTCGILAAWTVTAAAAFPVIAANQRLPPLSTEPNRCERAFIGNTIGQANGVYDKPLDLRLCDYTNEKSNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKADLEGAVFKNTVLSGSTFDEAKLENAVFEDTIIGYIDLQKLCTNKSISDEGRAELGCR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1306 292 Gene3D - 168 291 - -
Sto5g1306 292 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 52 292 IPR044195 -
Sto5g1306 292 SUPERFAMILY Zinc beta-ribbon 8 41 - -
Sto5g1306 292 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 52 292 - -
Sto5g1306 292 Pfam Pentapeptide repeats (8 copies) 187 224 IPR001646 -
Sto5g1306 292 Pfam Pentapeptide repeats (8 copies) 227 264 IPR001646 -
Sto5g1306 292 SUPERFAMILY Pentapeptide repeat-like 171 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1306 Sto-Chr5 8885896 8890915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1306 - - aprc:113846743 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1306 5 8885896 8890915 Sto5g1306 5 8885896 8890915 ECH