Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1305 ATGAAGAAGATTGCTGCTGCATCCTTTGCTTCAATACTCAAAGGATATATGCTTCTATTTTCATTAACTCTTCCCCAAGGAATACAAGGAATTGGTGTTAACTATGGCACAATAGCAAATAACCTTCCTCCACCATCTCAAGTTGCAAAATTCCTCATAGAATCCACCATCATCAACCGTGTGAGACTCTTCGATGCCAACCCAGAAATTTTACGAGCATTTGCTCACACAGGAATTGAAGTCTCCATTACAGTCTCTAATGACCAAATCCCCCACCTCACTAACCTAACCTTTGCTCAACAATGGCTAAACACCAATGTTCAACCCTTCGTCCCCGACACCGACCTCATCCGAATCCTCGTAGGCAACGAAGTCTTAGCCACCGCAAACAAACTCCTAATCAGCAATCTCGTCCCCGCAATGCAAACCCTCCACACAGCCCTCGTCGGAGCCTCCCTTGACCGCCGTATCAAAGTGTCGACGCCGAACTCTCTAGGCATTTTGTCGAACTCGAGCCCACCGTCCACCGGCAGATTCCGGCAAGGTTATGACACTCACGTGATTAAGCCAATGCTTAGTTTTCTGAAAGCCACCGATTCTCCCTTCATGGTTAACCCTTATCCATTCTTCGGCTGCTCCGCCGGAACCCTAGATTACGCACTTTTCCGGCCGAACCCCGGCGAGGTAGATGATAACACTAGTCTTCGATATACAAACATGTTGGATGCACAACTAGATGCTGTTTATTCGGCCATGAAAGTTTTGGGCTTTCAGGATCTCGAGATCGTCATTGCAGAAACGGGCTGGCCCACTTTGGGTGAGGCCCAACAAGTTGGTGTGGACCCCAATAGTGCTGCTGAGTTTAATAGGAATCTCATTCGCCACGTCTCTTCTGGGGTTGGAACACCTCTCATGCCGAACCGGACATTTGACACGtatatttttgcccttttcGATGAAAATCTCAAGCCCGGCCCAATTTGTGAGAGAAACTTTGGGCTCTTTAGGCCCAATATGACTCCTGTTTATAACATTGGGCTCATGAGAAACATGGTAGCTTCTGCGGCAGATGGTCATTATAGAGCGTTTTTGTTGACCATAATTGTTTTGAGCTTGATTAGTTTGTGGGCTTGA 1134 0.4656 MKKIAAASFASILKGYMLLFSLTLPQGIQGIGVNYGTIANNLPPPSQVAKFLIESTIINRVRLFDANPEILRAFAHTGIEVSITVSNDQIPHLTNLTFAQQWLNTNVQPFVPDTDLIRILVGNEVLATANKLLISNLVPAMQTLHTALVGASLDRRIKVSTPNSLGILSNSSPPSTGRFRQGYDTHVIKPMLSFLKATDSPFMVNPYPFFGCSAGTLDYALFRPNPGEVDDNTSLRYTNMLDAQLDAVYSAMKVLGFQDLEIVIAETGWPTLGEAQQVGVDPNSAAEFNRNLIRHVSSGVGTPLMPNRTFDTYIFALFDENLKPGPICERNFGLFRPNMTPVYNIGLMRNMVASAADGHYRAFLLTIIVLSLISLWA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1305 377 Pfam Glycosyl hydrolases family 17 31 345 IPR000490 GO:0004553|GO:0005975
Sto5g1305 377 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 353 IPR044965 GO:0004553|GO:0005975
Sto5g1305 377 Gene3D Glycosidases 29 354 - -
Sto5g1305 377 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 24 353 - -
Sto5g1305 377 SUPERFAMILY (Trans)glycosidases 31 346 IPR017853 -
Sto5g1305 377 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1305 Sto-Chr5 8880886 8882098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1305 16 349 Miscellaneous Gene Families AT3G46570 55.325 1.32e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1305 - - ccaj:109788601 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1305 5 8880886 8882098 Sto5g1305 5 8880886 8882098 ECH