Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1303 ATGGGTGGTGGTGACTGGCAGTCACTCCTTCAATCCATTTTCCTTGGTCTCATTTTCTCTTTCCTTCTCGCAAAGCTCATCTCCATCGTCGTCACATTCAAGGACGATAATCTTACCATTACTCGTAGTCGCAGCAGCAATGACCATTTCAGTAGGCTACAACCCGATGCCAAATTCGGGGACGTTGATTCGGGTACTAACCGCTCCGGTGATGAAGTCGGCGAGATTCACGAGACCGACACGGTCGTGGCCGAGCAGGGAAGTGTGAGAAACGTAAATACGGATGGTAGTAGCTgctctgatgatgatgatgatgattgggAGGGGGTGGAGTCTACGGAATTGGACGAGACTTTCAGCGCCGCCTCGGCTTTTGTGGCGGCTGCGGCCGCCGATCGGATGTCGCAGAAGGTTTCCAGTGATGTGCAGCTGCAGCTCTATGGGTTGTACAAGATTGTTACCGAAGGTCCGTGTACTGCGCCGCAGCCGTCGGCTCTGAAAATGACGGCTCGAGCCAAATGGCAAGCATGGCAGAAATTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTATATTGATATTGTGACTGAGCTATATCCTACTTGGGCGGTTGGTTCAACTTTGAAGGGCAAAACTGGAGATAGGAAAAGTTCAGAGCCTAAGGCATCGATGGGACCGGTATTCAGCTCTTTTGTCTATGAAGAGGATTCTAGCAATGATTTGAAAATGGATGCCATTCATGGATTTGCTCGAGAAGGAGATGCTGCTAATTTACTAAAGTGTATTGAAAATGGTGTTTCGGTGAATTTGAAGGGTGCGTTATTCATAGCCATTGCTTTACTAAACAGCGAGGGTCGGACACCATTGCATTGGGCTGTGGATCGTGGCCACCTGAATGTCACAGAGCTGCTTGTTAGCAAGAATGCTAATGTAAATGCCAAGTTGAATAAGACAGTATTCTTCAGTCCTCACCATGATTGCACAGAGGATGATGATGGACAAACACCATTACATTACGCTgctgtgtgtgagagagaagcCATAGCCGAGTATTTAGTGAAGCATAGTGCAGACTGCAATCTCAAGGATAACGATGGCAATTCCTCTCGTGACATATGCGAGTCAAATTGGCCTTGGATGCAACGTCTGGAGCAAGCTATTTGA 1167 0.4602 MGGGDWQSLLQSIFLGLIFSFLLAKLISIVVTFKDDNLTITRSRSSNDHFSRLQPDAKFGDVDSGTNRSGDEVGEIHETDTVVAEQGSVRNVNTDGSSCSDDDDDDWEGVESTELDETFSAASAFVAAAAADRMSQKVSSDVQLQLYGLYKIVTEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWAVGSTLKGKTGDRKSSEPKASMGPVFSSFVYEEDSSNDLKMDAIHGFAREGDAANLLKCIENGVSVNLKGALFIAIALLNSEGRTPLHWAVDRGHLNVTELLVSKNANVNAKLNKTVFFSPHHDCTEDDDGQTPLHYAAVCEREAIAEYLVKHSADCNLKDNDGNSSRDICESNWPWMQRLEQAI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1303 388 Pfam Ankyrin repeats (many copies) 286 354 IPR002110 GO:0005515
Sto5g1303 388 SMART ANK_2a 285 314 IPR002110 GO:0005515
Sto5g1303 388 SMART ANK_2a 242 271 IPR002110 GO:0005515
Sto5g1303 388 SMART ANK_2a 333 362 IPR002110 GO:0005515
Sto5g1303 388 Gene3D - 215 378 IPR036770 -
Sto5g1303 388 ProSiteProfiles Ankyrin repeat region circular profile. 285 315 - -
Sto5g1303 388 ProSiteProfiles Ankyrin repeat profile. 333 365 IPR002110 GO:0005515
Sto5g1303 388 SUPERFAMILY Ankyrin repeat 241 375 IPR036770 -
Sto5g1303 388 ProSiteProfiles Ankyrin repeat profile. 285 317 IPR002110 GO:0005515
Sto5g1303 388 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 4 383 - -
Sto5g1303 388 PRINTS Acyl-coA-binding protein signature 138 156 IPR000582 GO:0000062
Sto5g1303 388 PRINTS Acyl-coA-binding protein signature 161 176 IPR000582 GO:0000062
Sto5g1303 388 PRINTS Acyl-coA-binding protein signature 182 199 IPR000582 GO:0000062
Sto5g1303 388 SUPERFAMILY Acyl-CoA binding protein 114 203 IPR035984 GO:0000062
Sto5g1303 388 PRINTS Ankyrin repeat signature 286 301 IPR002110 GO:0005515
Sto5g1303 388 PRINTS Ankyrin repeat signature 349 363 IPR002110 GO:0005515
Sto5g1303 388 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 4 383 - -
Sto5g1303 388 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 115 205 IPR000582 GO:0000062
Sto5g1303 388 ProSiteProfiles Ankyrin repeat region circular profile. 333 365 - -
Sto5g1303 388 Gene3D - 109 214 IPR014352 -
Sto5g1303 388 Pfam Acyl CoA binding protein 116 196 IPR000582 GO:0000062
Sto5g1303 388 MobiDBLite consensus disorder prediction 45 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1303 Sto-Chr5 8873587 8877694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1303 4 382 Acyl Lipid Metabolism Gene Families AT5G53470 58.311 1.11e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1303 - - zju:107421805 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1303 5 8873587 8877694 Sto5g1303 5 8873587 8877694 ECH