Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1302 ATGGCCAAGGTGGTGGTTTACGCCGTCATAGCCACcgccttcctcttcttcttcgtcgTCCTCGCGCCTTTCCTCCGAGACGACCACCGTAAGGGCCCCGGCCTGAACCGCCGGTTCGGCTACAACATCCAAGATCGAACCCTGAGTTTCGACCCGCTCCTGGCTCAGATGCAGAGATCTAATACCAATAATACTACGAGTGCGTCCACGAGAAGCGGCGTTATCGAAACGTACCAATTCCTGATTGCGAGTGGGAAATTGAACACCACATTGAGGTTGACCATTTTATTCCCTTTGTTAGATAGAGACCCCAAAGATTATTCGATTAGTTTCAATGAGTTAGAGGCTTGGATTATTCGGCAGTCCATGGATAGATTGGATTATAGCACCCACGTTGCCTTGGACTCTAAGGATAAAAATGCAGACTCTTCCGTTTCTTTCAGGGAGTATTTTCCTCAATTTTCTGACACCGATTTAGcgAAGAAGGGGATGGAACATGGAGAAGCAGGATGGTGGCAAGTGCGATTTGATGCGGCGGACATTGATCATAATGGGCTTCTTAACTTCACAGAGCTTAGagaCTTCTTGCACCCGGAAGACAGCGAGAACGAAGCGACGCTGAAATGGCTATTGAGAGATAGATTTAAGCAGATggattatgatgatgatgggaAACTGAATTTCAAGGAATTCCAAGACCATGTGTATGCTTCGTAtgtgagttatgtggaatttgAAACTGCTGGAAAAGAGGCTCCTAAGCCACACGATAAGTTCCATGAGCTTGATGTCAACCATGACAAGTAA 807 0.4287 MAKVVVYAVIATAFLFFFVVLAPFLRDDHRKGPGLNRRFGYNIQDRTLSFDPLLAQMQRSNTNNTTSASTRSGVIETYQFLIASGKLNTTLRLTILFPLLDRDPKDYSISFNELEAWIIRQSMDRLDYSTHVALDSKDKNADSSVSFREYFPQFSDTDLAKKGMEHGEAGWWQVRFDAADIDHNGLLNFTELRDFLHPEDSENEATLKWLLRDRFKQMDYDDDGKLNFKEFQDHVYASYVSYVEFETAGKEAPKPHDKFHELDVNHDK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1302 268 ProSiteProfiles EF-hand calcium-binding domain profile. 211 241 IPR002048 GO:0005509
Sto5g1302 268 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 268 - -
Sto5g1302 268 SUPERFAMILY EF-hand 92 235 IPR011992 -
Sto5g1302 268 PANTHER RETICULOCALBIN 1 268 - -
Sto5g1302 268 SMART efh_1 210 238 IPR002048 GO:0005509
Sto5g1302 268 SMART efh_1 171 199 IPR002048 GO:0005509
Sto5g1302 268 Gene3D - 56 236 - -
Sto5g1302 268 Pfam EF-hand domain pair 175 234 IPR002048 GO:0005509
Sto5g1302 268 ProSitePatterns EF-hand calcium-binding domain. 219 231 IPR018247 -
Sto5g1302 268 ProSitePatterns EF-hand calcium-binding domain. 180 192 IPR018247 -
Sto5g1302 268 ProSiteProfiles EF-hand calcium-binding domain profile. 167 202 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1302 Sto-Chr5 8870062 8871156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1302 1 268 EF-hand Containing Proteins AT4G27790 38.182 4.99e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1302 K23901 - gmx:100806007 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1302 5 8870062 8871156 Sto5g1302 5 8870062 8871156 ECH