Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1286 ATGGAGTCTCTTGAATTGGCTCCTCTACTTCTGACTACTACATCATCTACTAATCCAGCTCTATTCAGACACACTTCTCGGGTGGTAAGGCTATCGGGCTTTCATTCTTTTCTCAGAAGAACAAGTGGAAATGGCTCCTTCTGTCTCAGAAGCTCGATTTCTGGTGCGAACGGTGGTTCACAAGACCAGCACTCTGCTTTTGAAGATGAAGCCCGGGAACGTAAAAGGAAAGGGGCTCTAGTCTTAACTAAAGAGACGGATGCTTCTGGCGCTCTAATTGGCTTTCATATGATTCCTGCGTCTGGCACAATCACTAAAGAAGATGTAACTACAGATGAAGTAGAACAATCTGAGGGCATAAAAGTAGAAGAATCTGAAGACACAGAAGGGGAAGAGAAAGCTCAAACTAGAGTGtcctataatattatttttgttacttCCGAGGCTGCACCATATTCGAAGACTGGTGGGCTAGCAGATGTTTGTGGTTCTTTGCCTATAGCACTAGCAGGTCGTGGACATCGTGTAATGGTTGTCTCACCTagatacctacgtggtacttcTCAGGATAGTATTTATTCTGGTACAGTTGATCTGAACCTACACTCTAAGATATATTGCTTTGGAGGGGTTCACGAAGTTGGCTTTTTCCATGAGTATAGGGAAGGTGTTGATTGGGTATTTGTAGATCATCCTTCATTCCATAGACCTGGAAATCCATATGGGGATAGTTATGGGGCTTTTGGTGATAACCAGtttcGGTTCACTTTACTTTGCCATGCAGCATGTGAAGCCCCACTGGTGCTTCCATTGGGAGGGTTCACTTATGGAGATAAATGCTTATTCCTTGTTAATGATTGGCATGCAAGCCTAGTTCCAGTACTTTTGGCAGCAAAGTATCGTCCACACGATGTATATAAAGATGCTCGTAGTATATTAGTGATACATAATATTGCGCATCAGGGAGTGGAACCTGCAATTACATATAGTAATTTGGGACTACCTCCAGAATGGCGTGGAGCATTAGAATGGGTGTTCCCTACTTGGGCAAGGACTCATGCTCTTGACACAGGTGAAGCTGTCAATTTTCTAAAAGGTGCAATCGTTACAGCTGACCGGATACTAACAGGCTATTCCTATGAGATAACAACTAGCGAAGGTGGATATGGTCTACATGAGCTTTTAAGCAGTCGAAGAAGTGTTCTCAATGGGATCACAAATGGAATTGATGTTTCTGAATGGGACCCATCTTCCGATGAACATATTGCTTGTCACTATTCTGCTGATGACCTTGCTGGGAAGGTCCAATGCAAGATTTCTTTGCAGAAGGAATTGGGTCTTCCCATTCGGCCTGATTGTCCATTGATTGGATTCATTGGAAGACTAGATTACCAAAAAGGCATCGACCTGATTCAGTTGGCAGTTCCAGAGCTCTTGGAAGATGATGTTCAATTTGTTATGCTTGGTTCAGGAGACCCAATATATGAAGACTGGATGAGAGCAACGGAGTCAGCTTATAGGGACAAATTCCGGGGTTGGGTTGGATTTAATGTTCCAGTTTCCCATATAATAAATGCAGGCTGTGATATACTTCTAATGCCATCCACATTTGAGCCCTGTGGACTGAATCAATTGTATGCAATGAGATATGGGACTATACCGGTGGTTCATGAAACTGGAGGACTGAGAGACACTGTACAAAATTTTAATCCATTTGCTGAGGGAGGCAATGGTGATGGTACAGGGTGGACGTTTTCTCCTCTAACGAAAGAGAGCATGTTAGAGGCTCTGAGATACGCCATTCTAACATATAGAGAACATAAGTCTTCTTGGGAGGGATTGATGAAAAGAGGAATGACGAGGGACTTCACATGGGTCAATGCAGCCACTCAATATGAACAAGTTTTCGAATGGACGTTCATCAACCCACCTTATGTTTCCTGA 1944 0.4244 MESLELAPLLLTTTSSTNPALFRHTSRVVRLSGFHSFLRRTSGNGSFCLRSSISGANGGSQDQHSAFEDEARERKRKGALVLTKETDASGALIGFHMIPASGTITKEDVTTDEVEQSEGIKVEESEDTEGEEKAQTRVSYNIIFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVVSPRYLRGTSQDSIYSGTVDLNLHSKIYCFGGVHEVGFFHEYREGVDWVFVDHPSFHRPGNPYGDSYGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGDKCLFLVNDWHASLVPVLLAAKYRPHDVYKDARSILVIHNIAHQGVEPAITYSNLGLPPEWRGALEWVFPTWARTHALDTGEAVNFLKGAIVTADRILTGYSYEITTSEGGYGLHELLSSRRSVLNGITNGIDVSEWDPSSDEHIACHYSADDLAGKVQCKISLQKELGLPIRPDCPLIGFIGRLDYQKGIDLIQLAVPELLEDDVQFVMLGSGDPIYEDWMRATESAYRDKFRGWVGFNVPVSHIINAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAEGGNGDGTGWTFSPLTKESMLEALRYAILTYREHKSSWEGLMKRGMTRDFTWVNAATQYEQVFEWTFINPPYVS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1286 647 Pfam Glycosyl transferases group 1 451 603 IPR001296 GO:0016757
Sto5g1286 647 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 57 646 - -
Sto5g1286 647 CDD GT5_Glycogen_synthase_DULL1-like 141 638 - -
Sto5g1286 647 Gene3D Glycogen Phosphorylase B; 411 622 - -
Sto5g1286 647 MobiDBLite consensus disorder prediction 53 72 - -
Sto5g1286 647 MobiDBLite consensus disorder prediction 109 133 - -
Sto5g1286 647 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 138 639 - -
Sto5g1286 647 Pfam Starch synthase catalytic domain 141 396 IPR013534 -
Sto5g1286 647 Hamap Glycogen synthase [glgA]. 140 639 IPR011835 GO:0004373
Sto5g1286 647 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 141 637 IPR011835 GO:0004373
Sto5g1286 647 Gene3D Glycogen Phosphorylase B; 160 636 - -
Sto5g1286 647 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 57 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1286 Sto-Chr5 8765307 8772471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1286 99 636 Glycosyltransferase AT3G01180 48.358 2.41e-166 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1286 K00703 - qsu:112034608 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1286 5 8765307 8772471 Sto5g1286 5 8765307 8772471 ECH