Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1271 ATGGCTCCCACACCAGCTAAGGCCACAGCCACCGTTTCCTCGTCGGAGCCTCCAAAGATTCACGCCTCCCACATCGGAAGCATCAAAGCCTTCGCTGAAGCAAACGGAGTGGGCCCCATCCCCTCCTCCTACCACTCCATCACCGAACCCCGAGACGACGTCGCTCACGACCTCGCTGCCTCCATCCCCGTCATCGacttctctctcctcacttcccACCACGATCCCCGCCGCCGCGCCTTCGCCGTCCGGCAACTCGGCAAGGCCTGCGCCGATTGGGGCTTCTTCATGATTACGAATCACGGAATCTCGGAAACCCTAATGGAGCAAGTGATAAACAAATCTCACGAGTTCCACAACTTGCCAATAGAGGAAAAGAAGGAATTCGCGGACAATAAGGGTCCCTTCACTCCCATCCGACACGGCACCAGCTTCCATCCTCAATCGGAGAAGGTTCATTACTGGAGAGACTATCTCAAGGTCCTAACCCACCCTCAATTCAATTTCCCTCACAAGCCCTACGGTTTCAAAGAGGTTGCGTATGAGTACTGCGAGAAGATCAGGGAGATAGCGAGGAATCTGATTGAGGCCATATCGGAGAGTTTGGGATTGGAAGCGAAGAGCCTAGTGGAATACACTGGATTTGATCGTGGTTTGACGCTAATGGCGGTGAATCTGTACCCGGCGTGCCCTGAGCCGGAGCTTGCATTGGGGATGCCGCCGCATTCAGATCATGGACTGTTGACGGTGCTGATACAGAACGGGATCGGAGGGCTTCAGGTGATGCAGGGTGGGAGATGGGTGAATGTGGATCCTCTGCCGAACTGCCTGGTGGTGAATACGGGAGATCAACTCGAGGCAGTGAGTAATGGGAGGTACAGGAGTGTGGTGCACCGTGCGGTACTGAACAATAGAGACACGAGGATTAGTGTGGCGGTGGCGAATGGACCGGAGTTGGAGAAGGAGATCGGGCCGGCGCCGGAGTTGGTGGAGAAAGAGGAGGAGGCCTTGTTCAAATGCACCACCTACTCCCACTACTTCCAAATTCAGCAACAATCACGGCTTTCTCATAAAAGCGCCTTGGATCAGATTCGGATTAATCCTCAAAACTAA 1113 0.5346 MAPTPAKATATVSSSEPPKIHASHIGSIKAFAEANGVGPIPSSYHSITEPRDDVAHDLAASIPVIDFSLLTSHHDPRRRAFAVRQLGKACADWGFFMITNHGISETLMEQVINKSHEFHNLPIEEKKEFADNKGPFTPIRHGTSFHPQSEKVHYWRDYLKVLTHPQFNFPHKPYGFKEVAYEYCEKIREIARNLIEAISESLGLEAKSLVEYTGFDRGLTLMAVNLYPACPEPELALGMPPHSDHGLLTVLIQNGIGGLQVMQGGRWVNVDPLPNCLVVNTGDQLEAVSNGRYRSVVHRAVLNNRDTRISVAVANGPELEKEIGPAPELVEKEEEALFKCTTYSHYFQIQQQSRLSHKSALDQIRINPQN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1271 370 SUPERFAMILY Clavaminate synthase-like 35 355 - -
Sto5g1271 370 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 166 IPR026992 -
Sto5g1271 370 MobiDBLite consensus disorder prediction 1 20 - -
Sto5g1271 370 Pfam 2OG-Fe(II) oxygenase superfamily 222 313 IPR044861 -
Sto5g1271 370 Gene3D - 23 355 IPR027443 -
Sto5g1271 370 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 214 317 IPR005123 -
Sto5g1271 370 PRINTS Isopenicillin N synthase signature 86 103 - -
Sto5g1271 370 PRINTS Isopenicillin N synthase signature 242 263 - -
Sto5g1271 370 PRINTS Isopenicillin N synthase signature 277 303 - -
Sto5g1271 370 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 25 357 - -
Sto5g1271 370 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 25 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1271 Sto-Chr5 8634788 8636053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1271 28 366 Glycosyltransferase AT5G59530 31.429 6.70e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1271 - K24028 gmx:100776216 480.33