Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1254 ATGGGCAGGAGTGGAGGTGCATCAATTTCAGTGTGGAGATGGTGGTGTTTAGTGTTGTTGTTTCCAGTGGTTGTAACACAAGACCAAGAAGCGTATTGTGCCCCTTCTTCCTGCGGCAATATCACAAACATCAGCCATCCATTTCGACTACAAGACGATCCACCATATTGTGGCGATCAGAGATACGAGTTGGCATGTGAAAATAATGTTACTGTGCTTCATTCGTCGGCAAAATACCATGTACTAGGAATCAACTACAATAACTTCACAATCCGACTCCGTGATCCTCACATTAAGGAGGCTGATTGCTCCACCTACCCTCTCTATTccttgttatttaattattatgatgAGCGTTATTATTTTCCATATTCGAGTGATCTCGATCTCCTTGAAGATCGAGTTCTAGTTGAAAACATCGTATACATCAACTGTAGCGATCCAGTGAAGGATGATGCTGAGTACGTGGATACGGCACCCTGCATCAATTGGAACTCCCAAACCCATATCTATGCCATTCTTGGTGACTTAAAAGCTCATAACTTGAAATTTCAGTGTCGTCTCAAATCCTTTGCACCCATCACCGCAGTTTGGCCTTCCTTCGTCCAAAACAACACAAACTTGTCTTATACTGATATTCACAGAGTGCTTTCCTATGGATTTGAGCTTTCCTGGTGGAGGAGAGCTTGCCAGGATCTTCCTTGTTCATCTCATGGCAGCTGCTATTTCAACTCTTCCTCTGAAAAACTCGAATGTCGTCCACTTGGCTGTACAACTCCGTTGGGATTTGGTTTTAAAACCAACTGCGGAAATTATGCAAAGCTGAGCATATTTGCAGAAGCGATGGAGAACGGAGCTCGACGTGAGACGGAGGACAAAAAGCTGGAAGATAAGAGGGCCAGAAGCGTGAAGAAAGCTAAGTCGAATGGTGAATTCGATAACCAGAGTGGTATTACTATGAGTCCTCTCTTCCATCCTGGAGGAGCTGCTAGGGATTCACCGATGGAGAGTGCGTTGGAGGGTGCAGGTCCGAATGCCCAGGTAGGTGCTGGTGTGAAGTCTTACAAAGATACTGTTATGGGAGGGCAGAATGGAAGCGGATCTCAGGCTgtggagagtgagaATATTTGCAAGAAGAAAGAGGACGATGATGGAGAGGTGGAAAGAACCATTAGTAAGGAGCCTGTTGAGAAGAGTGGGGGAGCTGCTTCGGGGCAGATGGGTGATCCTGGAGCTAATGGCCAGTCTAAGGCTATTTCCGGCTCTAGGTTTGGTGTCTTGGAGGATTTGGAGAATGATGATGGTAGTGGTTCAGTGGAAGCAATGGAAGGGGAGATTTTCTATAGTGTGGACCAGGGGAAGAGCAAAGGTAGTGGTGAGGGAAGGAAGTCTATTGGAGGTGAAGGGAGCTCTAGTAGAAGTCAGCAAAGAAATAATAAAGGGAAGGATAGTGGAGCTGGAAGGAGAGAAGGCAAGGAGAGGGATAAAGATGGAGTGGCAGCTAAGGAGCTTAGGGAGAAAGGAAGAGGTAGCAGATATAATAAGGAGGGGAGATCGGGTTTGTTAAGCTCAAAGATGGGAAGTAAGGCAGAGGAGCCTTTGAGGAAGCCTCTTGCTGTGATAAATTCTAGAAGACAAGAGCCGGTTGTGCAGAGGGTCTTTGAGAAAATTGTTGGTGATACGTTTAAACCACCCCCAAGCATGAACCACCAGACAAGAAAGGGTCCAACTCGGGTGGGGTTCGGGTGGCGTGACGGGTCTAAAGCGTTGGAGGTTATTAATAAAATCAAGTTGAAAGGTGTTCATAAAGTTGATACTGTGGGTTACAAAGGTGGGATTTGGCTGTTGTGGGATTTGAATCTTATGGATGTGGAGGTGTTGATTGAGGAATTCCAATTTATTCATGCTAAGGTGAAACCGAGGAGTGGTGGTGATTTCCTTCTTACTATTGTGTATGGCAGCCCGTATATAAGTAGTAGGGATGAGGCTTTTGATAAAATCAAGCAGATTGGCAGGAGCATTGATAGTCCTTGGGTTGTGGGTGGGGACTTTAATGCTTATATCTCGTGTGATGAGAAGGTTGGGGGAGCTGGTGGTAATAGGAGAAGTATGGAGAGTTTTGGTGAATGTGTTAATGATTGTGGTTGGATTGATTTGGGGTATAATGGGGTGAAATTTGCTTGGGATAGACAGGGGTTGAAGGAGAGAATTGATCGTTTCTTTTCCAATTATGATTGGAGGATGCTTCATCAGAATGCGTCTGTTTTCCACCTGTTTTCTAGGAAATCGGATCACAAGCCGGTGCTGTTAAAGTTTGATGTGAATAGGAAAGTGGATAAGAAGAAAAGGCCTTTCCGCTTTCTTGCCTCTTGGCTTCTTGATGATAGATTTGATGGCTTTATGAATGAGGCGTGGTAG 2418 0.4462 MGRSGGASISVWRWWCLVLLFPVVVTQDQEAYCAPSSCGNITNISHPFRLQDDPPYCGDQRYELACENNVTVLHSSAKYHVLGINYNNFTIRLRDPHIKEADCSTYPLYSLLFNYYDERYYFPYSSDLDLLEDRVLVENIVYINCSDPVKDDAEYVDTAPCINWNSQTHIYAILGDLKAHNLKFQCRLKSFAPITAVWPSFVQNNTNLSYTDIHRVLSYGFELSWWRRACQDLPCSSHGSCYFNSSSEKLECRPLGCTTPLGFGFKTNCGNYAKLSIFAEAMENGARRETEDKKLEDKRARSVKKAKSNGEFDNQSGITMSPLFHPGGAARDSPMESALEGAGPNAQVGAGVKSYKDTVMGGQNGSGSQAVESENICKKKEDDDGEVERTISKEPVEKSGGAASGQMGDPGANGQSKAISGSRFGVLEDLENDDGSGSVEAMEGEIFYSVDQGKSKGSGEGRKSIGGEGSSSRSQQRNNKGKDSGAGRREGKERDKDGVAAKELREKGRGSRYNKEGRSGLLSSKMGSKAEEPLRKPLAVINSRRQEPVVQRVFEKIVGDTFKPPPSMNHQTRKGPTRVGFGWRDGSKALEVINKIKLKGVHKVDTVGYKGGIWLLWDLNLMDVEVLIEEFQFIHAKVKPRSGGDFLLTIVYGSPYISSRDEAFDKIKQIGRSIDSPWVVGGDFNAYISCDEKVGGAGGNRRSMESFGECVNDCGWIDLGYNGVKFAWDRQGLKERIDRFFSNYDWRMLHQNASVFHLFSRKSDHKPVLLKFDVNRKVDKKKRPFRFLASWLLDDRFDGFMNEAW 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1254 805 MobiDBLite consensus disorder prediction 374 395 - -
Sto5g1254 805 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Sto5g1254 805 MobiDBLite consensus disorder prediction 359 529 - -
Sto5g1254 805 PANTHER OS01G0690200 PROTEIN 17 241 - -
Sto5g1254 805 MobiDBLite consensus disorder prediction 359 373 - -
Sto5g1254 805 MobiDBLite consensus disorder prediction 561 580 - -
Sto5g1254 805 MobiDBLite consensus disorder prediction 465 481 - -
Sto5g1254 805 MobiDBLite consensus disorder prediction 482 514 - -
Sto5g1254 805 SUPERFAMILY DNase I-like 598 773 IPR036691 -
Sto5g1254 805 MobiDBLite consensus disorder prediction 286 345 - -
Sto5g1254 805 MobiDBLite consensus disorder prediction 286 308 - -
Sto5g1254 805 PANTHER OS01G0113900 PROTEIN 17 241 - -
Sto5g1254 805 Gene3D Endonuclease/exonuclease/phosphatase 584 772 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1254 Sto-Chr5 8500168 8504464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1254 8 252 Receptor kinase-like Gene Family AT5G38260 26.538 4.09e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1254 - - gsj:114381128 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1254 5 8500168 8504464 Sto5g1254 5 8500168 8504464 ECH