Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1236 ATGGCTGACAGTCTTCGCATGGCCGTTGCTGTTCTTGGGAATGCTGCTTCAGTGTCCCTATATGCTGCCCCAACGGTTACTTTCAAAAGAGTGATAAGGAAGAAAAGCACAGAGGAGTTTTCATGTCTTCCGTACGTCATCGGACTCTTGAACTGTCTCCTTTATACGTGGTACGGCTTGCCTGTCGTGAGCTACAAATGGGAAAACTTCCCTCTGGTCACAGTGAACGGTGTTGGGATTGCCCTCGAGTTGTCTTATGTTATCATTTACTTTTGGTATGCTTCACCCAAAGGAAAGGTGAAGGTAGCCATGACAGCAATACCCGTTATGGTAGTGTTCTGCATCATTGCTCTTGTCTCAACCTTTGCCTTCCATGATAATCGTCACAGAAAACTACTCGTTGGTAGTATTGGCCTTGTGGTTTCAGTCGCACTGTACGCATCTCCTTTGGTTGTGATGAAGAAAGTGATACAAACCAAGAGTGTGGAATTCATGCCATTGCCTTTATCTCTGTGCGCATTCATAGCTAGTGTCCTCTGGTTGACATATGGACTTCTAATCCGAGACATATTCGTCGCGGGACCAAGTGTGGTTGGAGCTCCCTTGGGTATTCTCCAACTAGTGCTTCATTGCAAATACCGGAAAAGAAAAGCTGTTGTTGTTGTTACTGAAGAACCTGCAGTGAACAAGATTGACCTTGAAAAGGGTGGTGTTGAGATAATGGAGGACGTGGAAAAAGGCAACTCTGAGAAGAACATTATCACTGATGATCAAAGCAAGAGTTGA 786 0.4504 MADSLRMAVAVLGNAASVSLYAAPTVTFKRVIRKKSTEEFSCLPYVIGLLNCLLYTWYGLPVVSYKWENFPLVTVNGVGIALELSYVIIYFWYASPKGKVKVAMTAIPVMVVFCIIALVSTFAFHDNRHRKLLVGSIGLVVSVALYASPLVVMKKVIQTKSVEFMPLPLSLCAFIASVLWLTYGLLIRDIFVAGPSVVGAPLGILQLVLHCKYRKRKAVVVVTEEPAVNKIDLEKGGVEIMEDVEKGNSEKNIITDDQSKS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1236 261 PANTHER RAG1-ACTIVATING PROTEIN 1 4 247 - -
Sto5g1236 261 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016021
Sto5g1236 261 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Sto5g1236 261 Gene3D - 129 225 - -
Sto5g1236 261 Gene3D - 10 107 - -
Sto5g1236 261 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1236 Sto-Chr5 8340544 8341848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1236 1 261 Miscellaneous Gene Families AT5G53190 53.962 2.32e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1236 K15382 - gmx:100785477 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1236 5 8340544 8341848 Sto5g1236 5 8340544 8341848 ECH