Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1208 ATGGAGAAGAGCTGGAGCTCAGAGATAATCTCAGCCATTGAAGAGGTGTcgagggtagttatagttaaaTCTGGAGACAATCACGAAGCTTCTTCCCTCATCCCCACAACACCTTTCCTGTCTATATGTTACTTGGTTTTACAAGTTCTGGGtgggtttatttatttatttatttccttaATTAATCACACTCTATTTTCAAACATCAAGGTTGACTCATTATTTGCGATTGATGATGCTCTCTCTCTTGCAGATAAAATAGGACCAACAATGGCTGTTTTGAGACATGACATCCATCAGAATATTAGGAGATTGGAAGTGGTTCTTGACTCTAATCCCTCATTGAATTCCAATTTGGTTGAGATTTTCAAAACTGAGATAAACGAAGGCAAGGCAAAGAAGGGGCCCAGCTGCAGCAAAGCCTTTGTTTGGCTTACTAGAGCCCTGGATTTTGCGTCGGCACTATTACAAAGAGTGGCAAGTGAGCCTGGAAGAAACTTGGAGGAAGCAGTGGAAGAGTGTTATAACATCACTTTGAAACCATGGCATGGATGGATTTCATCAGCTGCTTTCAGAgtGGCTTTGAAACTAGTGCCTGATAGTAAGACCTTCATTGATCTCCTCAAGGCCAAAGACGAAAGCTATGAATCCCATGTGGAGAAAATGAAGATTGTGGTTTCAATGCTTGTCCCTTTTCTTGAGGATATCCATTGTATTCTGCGTACAACTTGGACAACCTCAAGTCCACATGAAGTCAATAACCAATTCGCAGTTTCATTGTGTATATCTCCGTTTCCTTCCCCACTTCTGTTCATTGCAATAAGTGCAGCAACCAAACCAGCATTGCTTGCTATGGTTGGCTCAGTGAACTTGGGTTGGTTCCTATCATCGATGAAGTTATCATGTGGGTCAGGTCCTCCTACCATGGCTCCCAAAACAACCTGTGGATTTGGATCTTTAGAGTTTAGCCATCTTTTCCCATCTTCACAGGAATATTTCTTACCATCCCATGGGATTGATGCACTTCTGTGA 1032 0.406 MEKSWSSEIISAIEEVSRVVIVKSGDNHEASSLIPTTPFLSICYLVLQVLGGFIYLFISLINHTLFSNIKVDSLFAIDDALSLADKIGPTMAVLRHDIHQNIRRLEVVLDSNPSLNSNLVEIFKTEINEGKAKKGPSCSKAFVWLTRALDFASALLQRVASEPGRNLEEAVEECYNITLKPWHGWISSAAFRVALKLVPDSKTFIDLLKAKDESYESHVEKMKIVVSMLVPFLEDIHCILRTTWTTSSPHEVNNQFAVSLCISPFPSPLLFIAISAATKPALLAMVGSVNLGWFLSSMKLSCGSGPPTMAPKTTCGFGSLEFSHLFPSSQEYFLPSHGIDALL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1208 343 Gene3D Glycolipid transfer protein 2 245 IPR036497 -
Sto5g1208 343 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 81 242 - -
Sto5g1208 343 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 6 72 - -
Sto5g1208 343 SUPERFAMILY Glycolipid transfer protein, GLTP 80 240 IPR036497 -
Sto5g1208 343 Pfam Glycolipid transfer protein (GLTP) 35 208 IPR014830 GO:0005737|GO:0120009|GO:0120013
Sto5g1208 343 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 6 72 - -
Sto5g1208 343 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 81 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1208 Sto-Chr5 8153995 8155649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1208 117 236 Acyl Lipid Metabolism Gene Families AT2G34690 21.488 3.63e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1208 - - gmx:100806166 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1208 5 8153995 8155649 Sto5g1208 5 8153995 8155649 ECH