Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1192 ATGGATAGTTTAGGCCTTCAAAAGATGGTGAAGTCCGTACCGTCTAAAGCTTTAGTGATCAGAATCAATTTGGTTTTCCTTGCTTTGTTTCTTATTATTTATGCAACTTTCCTTCTTCGGCCATCTTCTTCAATCTACTTTGAGAATGCAGCCTCCCTAGTGAGGTGCTCCTTGCGCGAATGCCATCACAAGGCAGAAAAGAGCATAAAAAAGAAAGCAGTGTTGGAGAAGCCTCAAATCAATTCAAGAATGCCAAAGGGTATTGCAAGTAAGATAGAGGTACCGAGCTTCTTTCGCAAAATGGGGAAAGGGATGAAGATTGGGATGGTAAACATGGAAGAGGATGATGTGGGTGAGTGGAGGTCACAAGGAGAAACAATAAATGTTAAATTCGACAGGGTATCACAGTTGTTCAATTGGACAGATTTATTCCCAGAGTGGATAGACGAGGAGGAAGAAACTGATGTCCCATCATGCCCGGAGATCCCAATGCCAGAATTTGAAGCATATGAAAACATGGACGTAATTGTGGCTAAATTGCCATGCAAGCAGCCCGAAGAAGGGTGGGGAAGGGATGTGTTTCGATTACAAGTTAATCTGATAGCAGCCAATCTGGCTgtgaagaaagggaagagagatTGGAATTGGAAGACGAAAGTGGTATTCTTGAGCAAGTGTAGACCAATGCTTGAGCTGTTTCGATGTGAGGACATGGTTAAGCACCAAGGTGACTGGTGGTATTATGAGCCAGAGGTGAAGAGGTTGGAGCAAAAAACTTCATTGCCTATTGGTTCCTGCAAATTGTCTCTGCCCCTGTGGGAACAAGGAATTGACGAGGTGTACGACTTATCCAAGATCCAGAAAAGCGTAGCAAGCGGAGCGAGAATAAAACGCGAAGCCTACGCCACCGTACTCCACTCCAAAGAAGCCTACGTTTGTGGCGCAATAACTCTAGCACAGAGCCTCCTTAAAACCGGAACCAAACGCGACCTTATCCTCCTCATAGACAAGTCTATCTCCGCTCCCAAACGCCAGGCTCTCGCCGAGGCGGGTTGGAAGATCCGGATCATAACCCGGATCCGAAACCCCCGAGCCGAGACCGGCACCTACAACGAGTACAACTACAGCAAGTTCCGCCTATGGCAGCTCACCGACTACCACAAGATCATCTTCATCGACGCCGACATCCTCGTCCTCCGCAACCTCGACATCCTCTTCCACTTCCCCCAAATGTCCGCCACCGGGAACGACCAATCCATCTTCAACTCCGGCATAATGGTGATCGAGCCTTCCAATTGCACGTTCCGCGCGCTGATGCAACGGCGCGACGACATCGTATCGTACAACGGGGGAGACCAAGGGTTTCTGAACGAGATCTTCGTGTGGTGGCACAGATTGCCGAGGAGGGTGAATTACCTGAAGAATTTCTGGGCGAACACGACGATTGAAGCGAGCGTGAAGAATGGGCTATTCGCGGCGGATCCGCCGAGGTTGTACTCGATTCATTATTTGGGGCTGAAGCCGTGGCATTGCTATAGGGACTACGATTGCAATTGGGACGTGGAGGATCAGCGCGTGTACGCGAGTGACGTGGCGCACCGGAGGTGGTGGAGGTTCTACGATGGGATGGAGGAGAGGTTGAAGGTTTTCTGTAGGTTAACGAGGCAGCGTAGGACGGAGTTGAATTGGGAGAGGAGGAAAGCTGGGAAGAAGGGATTGTTGGATGGGCATTGGAAGATTAATATTACCGATCCCAGACGATCTGGCTCTCTTTTGATGgattaa 1785 0.4852 MDSLGLQKMVKSVPSKALVIRINLVFLALFLIIYATFLLRPSSSIYFENAASLVRCSLRECHHKAEKSIKKKAVLEKPQINSRMPKGIASKIEVPSFFRKMGKGMKIGMVNMEEDDVGEWRSQGETINVKFDRVSQLFNWTDLFPEWIDEEEETDVPSCPEIPMPEFEAYENMDVIVAKLPCKQPEEGWGRDVFRLQVNLIAANLAVKKGKRDWNWKTKVVFLSKCRPMLELFRCEDMVKHQGDWWYYEPEVKRLEQKTSLPIGSCKLSLPLWEQGIDEVYDLSKIQKSVASGARIKREAYATVLHSKEAYVCGAITLAQSLLKTGTKRDLILLIDKSISAPKRQALAEAGWKIRIITRIRNPRAETGTYNEYNYSKFRLWQLTDYHKIIFIDADILVLRNLDILFHFPQMSATGNDQSIFNSGIMVIEPSNCTFRALMQRRDDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTIEASVKNGLFAADPPRLYSIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWRFYDGMEERLKVFCRLTRQRRTELNWERRKAGKKGLLDGHWKINITDPRRSGSLLMD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1192 594 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 6 588 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Sto5g1192 594 CDD GT8_Glycogenin 299 543 - -
Sto5g1192 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 296 546 IPR029044 -
Sto5g1192 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 546 IPR029044 -
Sto5g1192 594 Pfam Glycosyl transferase family 8 304 408 IPR002495 GO:0016757
Sto5g1192 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 6 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1192 Sto-Chr5 8040323 8043125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1192 72 593 Glycosyltransferase AT4G33330 66.981 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1192 K20890 - gmx:100780684 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1192 5 8040323 8043125 Sto5g1192 5 8040323 8043125 ECH