Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1175 ATGCACGCCAAGACGGATTCTGAAGTGACTAGCAGTATTGCTCCCTCCTCTCCCACTAGATCTCCACGTCGTCCCGTGTACTACGTGCAGAGTCCTTCCAGAGACTCCCACGATGGGGAGAAGACAGCGACGTCGTTTCACTCCACCCCTGTGCTCAGCCCCATGGGATCTCCCCCACACTCCCACGCCTCTCTTGGTCACCACTCTCGCGAGTCTTCCTCTAGCAGGTTCTCTGGCTCCCGCAAGCGCAAGCCTCATCAGAAGCCATGGAAGGAACCTGATGTCATTGAGGAAGAAGGTCTTCTTCCCAATGAGGATCGCCATAAGCCTCTCCCTCGTCGCTGCTATTTTCTCGCTTTTGTTCTCGGCTTCATTCTTCTCTTCACCGTCTTCTCTTTGATTCTCTGGGGTGCCAGTAAGCCTATGAAGCCTAAAATCTCCATGAAGAGCATAAAATTTGATCATATTAGGGTTCAGGCTGGTGCGGATGCCACAGGAGTGGCCACCGATATGATTACCCTCAATTCTACTGTGAGATTCACATATCGCAACACTGGAACGTTCTTTGGGGTCCATGTTTCCGCAACGCCCCTAGATCTAACCTATTCGCAGATCACAATTGCTTCCGGAGAATTGAAGAAGTTTCATCAGTCAAGAAAGAGTCAAAGAACAGTAAGTGTGGCAGTTATGGGTAATAAGATTGCTCTATATGGGAGTGGTGCGAGCTTAAGCAGTTCAACGGGTGCGCCCACTGTACCAGTACAGTTGAAATTGAGCTTTGTGCTTCGATCAAGAGCCTACGTTCTTGGGAAGTTGGTGAAGCCGAAATTCAACAAGGGAATTGAGTGTTCTATAACTCTGGATCCTAAAAAGCTCAATGCTACAATTCCACTCAAGAATTCCTGCACAATCGATTAA 918 0.488 MHAKTDSEVTSSIAPSSPTRSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLSPMGSPPHSHASLGHHSRESSSSRFSGSRKRKPHQKPWKEPDVIEEEGLLPNEDRHKPLPRRCYFLAFVLGFILLFTVFSLILWGASKPMKPKISMKSIKFDHIRVQAGADATGVATDMITLNSTVRFTYRNTGTFFGVHVSATPLDLTYSQITIASGELKKFHQSRKSQRTVSVAVMGNKIALYGSGASLSSSTGAPTVPVQLKLSFVLRSRAYVLGKLVKPKFNKGIECSITLDPKKLNATIPLKNSCTID 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1175 305 MobiDBLite consensus disorder prediction 1 96 - -
Sto5g1175 305 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 66 303 - -
Sto5g1175 305 MobiDBLite consensus disorder prediction 1 26 - -
Sto5g1175 305 Pfam Late embryogenesis abundant protein 180 275 IPR004864 -
Sto5g1175 305 MobiDBLite consensus disorder prediction 64 78 - -
Sto5g1175 305 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 66 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1175 Sto-Chr5 7884725 7885855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1175 - - tcc:18591173 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1175 5 7884725 7885855 Sto5g1175 5 7884725 7885855 ECH